Christian Goll
8722a9ce78
reordered dependencies and removed doc dependencies OBS-URL: https://build.opensuse.org/request/show/902890 OBS-URL: https://build.opensuse.org/package/show/science/seqan3?expand=0&rev=1
107 lines
3.2 KiB
RPMSpec
107 lines
3.2 KiB
RPMSpec
#
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# spec file for package seqan3
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#
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# Copyright (c) 2021 SUSE LLC
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#
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# All modifications and additions to the file contributed by third parties
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# remain the property of their copyright owners, unless otherwise agreed
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# upon. The license for this file, and modifications and additions to the
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# file, is the same license as for the pristine package itself (unless the
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# license for the pristine package is not an Open Source License, in which
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# case the license is the MIT License). An "Open Source License" is a
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# license that conforms to the Open Source Definition (Version 1.9)
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# published by the Open Source Initiative.
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# Please submit bugfixes or comments via https://bugs.opensuse.org/
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#
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Name: seqan3
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Version: 3.0.3
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Release: 0
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Summary: The modern C++ library for sequence analysis
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License: BSD-3-Clause
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Group: Development/Languages/C and C++
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URL: https://www.seqan.de/
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Source: https://github.com/seqan/seqan3/releases/download/%{version}/seqan3-%{version}-Source.tar.xz
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# PATCH-FIX-FEDORA
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Patch0: %{name}-unbundle_benchmark.patch
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Patch1: %{name}-cppreference.patch
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Patch2: %{name}-unbundle_gtest.patch
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BuildRequires: benchmark-devel
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BuildRequires: cereal-devel >= 1.2.3
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BuildRequires: cmake >= 3.4
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BuildRequires: dos2unix
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BuildRequires: gcc
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BuildRequires: gcc-c++
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BuildRequires: make
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BuildRequires: pkgconfig
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BuildRequires: range-v3-devel >= 0.11.0
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BuildRequires: xz
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BuildRequires: pkgconfig(bzip2) >= 1.0
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BuildRequires: pkgconfig(gtest) >= 1.10.0
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BuildRequires: pkgconfig(lemon)
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BuildRequires: pkgconfig(zlib) >= 1.2
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BuildArch: noarch
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%description
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SeqAn3 is the new version of the popular SeqAn template
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library for the analysis of biological sequences.
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It enables the rapid development of high-performance
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solutions by providing generic algorithms and
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data structures for:
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- sequence representation and transformation
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- full-text indexing and efficient search
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- sequence alignment
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- input/output of common file formats
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%package devel
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Summary: SeqAn3 header only files
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Requires: cereal-devel >= 1.2.3
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Requires: cmake >= 3.4
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Requires: range-v3-devel >= 0.11.0
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Requires: pkgconfig(bzip2) >= 1.0
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Requires: pkgconfig(zlib) >= 1.2
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Provides: bundled(sdsl-lite-devel) = 3.0.0
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Provides: bundled(sdsl-devel) = 3.0.0
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Provides: bundled(SDSL-devel) = 3.0.0
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%description devel
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C++ headers files of SeqAn3, including CMake configuration files.
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%prep
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%autosetup -n %{name}-%{version}-Source -N
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dos2unix test/cmake/seqan3_require_benchmark.cmake
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%patch0 -p1 -b .backup
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%patch1 -p1 -b .backup
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%patch2 -p1 -b .backup
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# Unbundle libraries
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rm -rf submodules/cereal
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rm -rf submodules/range-v3
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rm -rf submodules/sdsl-lite/cereal
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rm -rf submodules/sdsl-lite/googletest
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# SDSL 3.0 is a new SDSL pre-release, under development.
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# See https://github.com/xxsds/sdsl-lite
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cp -p submodules/sdsl-lite/LICENSE submodules/sdsl-lite/sdsl-LICENSE
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# Fix file permissions
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find . -type f -name "*.hpp" -exec chmod 0644 '{}' \;
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%build
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%cmake
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%make_build
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%install
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%cmake_install
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%files devel
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%{_datadir}/doc/%{name}/
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%{_includedir}/%{name}/
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%{_datadir}/cmake/%{name}/
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%changelog
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