Accepting request 417823 from home:badshah400:branches:science

- Add cmake-hdf5-detection.patch to fix detection of hdf5 with
  cmake >= 3.6
  (https://gitlab.kitware.com/cmake/cmake/issues/16225).

OBS-URL: https://build.opensuse.org/request/show/417823
OBS-URL: https://build.opensuse.org/package/show/devel:tools:building/cmake?expand=0&rev=260

cmake-hdf5-detection.patch

@@ -0,0 +1,26 @@
+From 8eb0b56c2ace0f005cba436268337f509e06033f Mon Sep 17 00:00:00 2001
+From: Chuck Atkins <chuck.atkins@kitware.com>
+Date: Tue, 2 Aug 2016 10:34:51 -0400
+Subject: [PATCH] FindHDF5: Make sure compile definition vars keep the -D flag
+
+---
+ Modules/FindHDF5.cmake | 2 +-
+ 1 file changed, 1 insertion(+), 1 deletion(-)
+
+diff --git a/Modules/FindHDF5.cmake b/Modules/FindHDF5.cmake
+index 50e1892..a898386 100644
+--- a/Modules/FindHDF5.cmake
++++ b/Modules/FindHDF5.cmake
+@@ -332,7 +332,7 @@ macro( _HDF5_parse_compile_line
+     set( RE " -D([^ ]*)")
+     string( REGEX MATCHALL "${RE}" definition_flags "${${compile_line_var}}" )
+     foreach( DEF IN LISTS definition_flags )
+-        string( REGEX REPLACE "${RE}" "\\1" DEF "${DEF}" )
++        string( STRIP "${DEF}" DEF )
+         list( APPEND ${definitions} ${DEF} )
+     endforeach()
+ 
+--
+libgit2 0.24.0
+
+

cmake.changes

@@ -1,3 +1,10 @@
+-------------------------------------------------------------------
+Mon Aug  8 00:18:51 UTC 2016 - badshah400@gmail.com
+
+- Add cmake-hdf5-detection.patch to fix detection of hdf5 with
+  cmake >= 3.6
+  (https://gitlab.kitware.com/cmake/cmake/issues/16225).
+
 -------------------------------------------------------------------
 Sun Jul 24 12:53:26 UTC 2016 - foss@grueninger.de
 

cmake.spec

@@ -38,6 +38,8 @@ Patch4:         form.patch
 Patch5:         system-libs.patch
 # PATCH-FIX-UPSTREAM cmake-version-in-generated-files.patch -- version number to be found in OBS
 Patch6:         cmake-version-in-generated-files.patch
+# PATCH-FIX-UPSTREAM cmake-hdf5-detection.patch badshah400@gmail.com -- Fix hdf5 detection with cmake >= 3.6 (https://gitlab.kitware.com/cmake/cmake/issues/16225)
+Patch7:         cmake-hdf5-detection.patch
 BuildRequires:  curl-devel
 BuildRequires:  fdupes
 BuildRequires:  gcc-c++
@@ -70,6 +72,7 @@ echo "`grep %{name}-%{version}.tar.gz %{SOURCE5} | grep -Eo '^[0-9a-f]+'`  %{SOU
 %patch4 -p1
 %patch5 -p1
 %patch6 -p1
+%patch7 -p1
 
 %build
 # FIXME: you should use the %%configure macro