Sync from SUSE:SLFO:Main superlu revision dd99c2a1b6583f0360d4de2143ff9ad2
This commit is contained in:
commit
a52e53fc1b
23
.gitattributes
vendored
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23
.gitattributes
vendored
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@ -0,0 +1,23 @@
|
|||
## Default LFS
|
||||
*.7z filter=lfs diff=lfs merge=lfs -text
|
||||
*.bsp filter=lfs diff=lfs merge=lfs -text
|
||||
*.bz2 filter=lfs diff=lfs merge=lfs -text
|
||||
*.gem filter=lfs diff=lfs merge=lfs -text
|
||||
*.gz filter=lfs diff=lfs merge=lfs -text
|
||||
*.jar filter=lfs diff=lfs merge=lfs -text
|
||||
*.lz filter=lfs diff=lfs merge=lfs -text
|
||||
*.lzma filter=lfs diff=lfs merge=lfs -text
|
||||
*.obscpio filter=lfs diff=lfs merge=lfs -text
|
||||
*.oxt filter=lfs diff=lfs merge=lfs -text
|
||||
*.pdf filter=lfs diff=lfs merge=lfs -text
|
||||
*.png filter=lfs diff=lfs merge=lfs -text
|
||||
*.rpm filter=lfs diff=lfs merge=lfs -text
|
||||
*.tbz filter=lfs diff=lfs merge=lfs -text
|
||||
*.tbz2 filter=lfs diff=lfs merge=lfs -text
|
||||
*.tgz filter=lfs diff=lfs merge=lfs -text
|
||||
*.ttf filter=lfs diff=lfs merge=lfs -text
|
||||
*.txz filter=lfs diff=lfs merge=lfs -text
|
||||
*.whl filter=lfs diff=lfs merge=lfs -text
|
||||
*.xz filter=lfs diff=lfs merge=lfs -text
|
||||
*.zip filter=lfs diff=lfs merge=lfs -text
|
||||
*.zst filter=lfs diff=lfs merge=lfs -text
|
||||
10
README.SUSE
Normal file
10
README.SUSE
Normal file
|
|
@ -0,0 +1,10 @@
|
|||
This version of SuperLU is slightly different form the original SuperLU
|
||||
available on http://crd.lbl.gov/~xiaoye/SuperLU/. For legal reasons the
|
||||
routine mc64ad from the Harwell Subroutine Library cannot be redistributed
|
||||
by openSUSE and have been removed form the sources.
|
||||
|
||||
mc64ad.c sgsisx.c sldperm.c dgsisx.c dldperm.c cgsisx.c cldperm.c zgsisx.c zldperm.c
|
||||
were removed from the tarball.
|
||||
|
||||
However the SuperLU library provided by openSUSE is fully functionnal
|
||||
except that the mc64ad routine is not used.
|
||||
4
_multibuild
Normal file
4
_multibuild
Normal file
|
|
@ -0,0 +1,4 @@
|
|||
<multibuild>
|
||||
<package>gnu-hpc</package>
|
||||
<package>serial</package>
|
||||
</multibuild>
|
||||
29
get-tarball.sh
Normal file
29
get-tarball.sh
Normal file
|
|
@ -0,0 +1,29 @@
|
|||
#!/bin/bash
|
||||
set -e
|
||||
|
||||
VERSION=5.3.0
|
||||
FILES="mc64ad.c sgsisx.c sldperm.c dgsisx.c dldperm.c cgsisx.c cldperm.c zgsisx.c zldperm.c"
|
||||
URL="https://github.com/xiaoyeli/superlu/archive/v$VERSION/superlu-$VERSION.tar.gz"
|
||||
TAR="superlu-$VERSION.tar.gz"
|
||||
|
||||
WORKDIR="$(mktemp -d superlu.XXXX)"
|
||||
|
||||
TODIR="$(pwd)"
|
||||
cd "$WORKDIR"
|
||||
|
||||
wget $URL
|
||||
tar xfz superlu-$VERSION.tar.gz
|
||||
|
||||
for file in $FILES; do
|
||||
rm superlu-$VERSION/SRC/$file
|
||||
done
|
||||
|
||||
if [ -e "$TODIR/$TAR" ]; then
|
||||
echo "$TAR already exists."
|
||||
else
|
||||
tar cfz "$TODIR/$TAR" superlu-$VERSION
|
||||
fi
|
||||
|
||||
cd "$TODIR"
|
||||
rm -r "$WORKDIR"
|
||||
|
||||
BIN
superlu-6.0.0.tar.gz
(Stored with Git LFS)
Normal file
BIN
superlu-6.0.0.tar.gz
(Stored with Git LFS)
Normal file
Binary file not shown.
114
superlu-examples_Makefile_remove_itersol.patch
Normal file
114
superlu-examples_Makefile_remove_itersol.patch
Normal file
|
|
@ -0,0 +1,114 @@
|
|||
diff --git a/EXAMPLE/Makefile b/EXAMPLE/Makefile
|
||||
index eb961e3..0ae9052 100644
|
||||
--- a/EXAMPLE/Makefile
|
||||
+++ b/EXAMPLE/Makefile
|
||||
@@ -39,8 +39,6 @@ SLINXEXM = slinsolx.o
|
||||
SLINXEXM1 = slinsolx1.o
|
||||
SLINXEXM2 = slinsolx2.o
|
||||
SLINXEXM3 = slinsolx3.o
|
||||
-SITSOL = sitersol.o sfgmr.o
|
||||
-SITSOL1 = sitersol1.o sfgmr.o
|
||||
|
||||
DLINEXM = dlinsol.o dreadtriple_noheader.o #dgstrf.o dcolumn_dfs.o #sp_ienv.o
|
||||
DLINEXM1 = dlinsol1.o
|
||||
@@ -49,8 +47,6 @@ DLINXEXM1 = dlinsolx1.o
|
||||
DLINXEXM2 = dlinsolx2.o
|
||||
DLINXEXM3 = dlinsolx3.o
|
||||
SUPERLUEXM = superlu.o sp_ienv.o
|
||||
-DITSOL = ditersol.o dfgmr.o
|
||||
-DITSOL1 = ditersol1.o dfgmr.o
|
||||
|
||||
CLINEXM = clinsol.o
|
||||
CLINEXM1 = clinsol1.o
|
||||
@@ -58,8 +54,6 @@ CLINXEXM = clinsolx.o
|
||||
CLINXEXM1 = clinsolx1.o
|
||||
CLINXEXM2 = clinsolx2.o
|
||||
CLINXEXM3 = clinsolx3.o
|
||||
-CITSOL = citersol.o cfgmr.o
|
||||
-CITSOL1 = citersol1.o cfgmr.o
|
||||
|
||||
ZLINEXM = zlinsol.o
|
||||
ZLINEXM1 = zlinsol1.o
|
||||
@@ -67,20 +61,17 @@ ZLINXEXM = zlinsolx.o
|
||||
ZLINXEXM1 = zlinsolx1.o
|
||||
ZLINXEXM2 = zlinsolx2.o
|
||||
ZLINXEXM3 = zlinsolx3.o
|
||||
-ZITSOL = zitersol.o zfgmr.o
|
||||
-ZITSOL1 = zitersol1.o zfgmr.o
|
||||
|
||||
|
||||
all: single double complex complex16
|
||||
|
||||
-single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 slinsolx3 \
|
||||
- sitersol sitersol1
|
||||
+single: slinsol slinsol1 slinsolx slinsolx1 slinsolx2 slinsolx3
|
||||
+
|
||||
double: dlinsol dlinsol1 dlinsolx dlinsolx1 dlinsolx2 dlinsolx3 \
|
||||
- superlu ditersol ditersol1
|
||||
-complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 clinsolx3 \
|
||||
- citersol citersol1
|
||||
-complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zlinsolx3 \
|
||||
- zitersol zitersol1
|
||||
+ superlu
|
||||
+complex: clinsol clinsol1 clinsolx clinsolx1 clinsolx2 clinsolx3
|
||||
+
|
||||
+complex16: zlinsol zlinsol1 zlinsolx zlinsolx1 zlinsolx2 zlinsolx3
|
||||
|
||||
slinsol: $(SLINEXM) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(SLINEXM) $(LIBS) -lm -o $@
|
||||
@@ -100,11 +91,6 @@ slinsolx2: $(SLINXEXM2) $(SUPERLULIB)
|
||||
slinsolx3: $(SLINXEXM3) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(SLINXEXM3) $(LIBS) -lm -o $@
|
||||
|
||||
-sitersol: $(SITSOL) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(SITSOL) $(LIBS) -lm -o $@
|
||||
-
|
||||
-sitersol1: $(SITSOL1) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(SITSOL1) $(LIBS) -lm -o $@
|
||||
|
||||
dlinsol: $(DLINEXM) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(DLINEXM) $(LIBS) -lm -o $@
|
||||
@@ -127,12 +113,6 @@ dlinsolx3: $(DLINXEXM3) $(SUPERLULIB)
|
||||
superlu: $(SUPERLUEXM) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(SUPERLUEXM) $(LIBS) -lm -o $@
|
||||
|
||||
-ditersol: $(DITSOL) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(DITSOL) $(LIBS) -lm -o $@
|
||||
-
|
||||
-ditersol1: $(DITSOL1) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(DITSOL1) $(LIBS) -lm -o $@
|
||||
-
|
||||
clinsol: $(CLINEXM) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(CLINEXM) $(LIBS) -lm -o $@
|
||||
|
||||
@@ -151,12 +131,6 @@ clinsolx2: $(CLINXEXM2) $(SUPERLULIB)
|
||||
clinsolx3: $(CLINXEXM3) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(CLINXEXM3) $(LIBS) -lm -o $@
|
||||
|
||||
-citersol: $(CITSOL) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(CITSOL) $(LIBS) -lm -o $@
|
||||
-
|
||||
-citersol1: $(CITSOL1) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(CITSOL1) $(LIBS) -lm -o $@
|
||||
-
|
||||
zlinsol: $(ZLINEXM) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(ZLINEXM) $(LIBS) -lm -o $@
|
||||
|
||||
@@ -175,11 +149,6 @@ zlinsolx2: $(ZLINXEXM2) $(SUPERLULIB)
|
||||
zlinsolx3: $(ZLINXEXM3) $(SUPERLULIB)
|
||||
$(LOADER) $(LOADOPTS) $(ZLINXEXM3) $(LIBS) -lm -o $@
|
||||
|
||||
-zitersol: $(ZITSOL) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(ZITSOL) $(LIBS) -lm -o $@
|
||||
-
|
||||
-zitersol1: $(ZITSOL1) $(SUPERLULIB)
|
||||
- $(LOADER) $(LOADOPTS) $(ZITSOL1) $(LIBS) -lm -o $@
|
||||
|
||||
.c.o:
|
||||
$(CC) $(CFLAGS) $(CDEFS) $(INCLUDEDIR) -c $< $(VERBOSE)
|
||||
@@ -189,7 +158,7 @@ zitersol1: $(ZITSOL1) $(SUPERLULIB)
|
||||
|
||||
clean:
|
||||
rm -f *.o *linsol *linsol1 *linsolx *linsolx1 *linsolx2 *linsolx3 \
|
||||
- superlu *itersol *itersol1
|
||||
+ superlu
|
||||
14
superlu-make.linux.patch
Normal file
14
superlu-make.linux.patch
Normal file
|
|
@ -0,0 +1,14 @@
|
|||
diff -Nrua a/MAKE_INC/make.linux b/MAKE_INC/make.linux
|
||||
--- a/MAKE_INC/make.linux
|
||||
+++ b/MAKE_INC/make.linux
|
||||
@@ -21,8 +21,8 @@
|
||||
#
|
||||
# The name of the libraries to be created/linked to
|
||||
#
|
||||
-SuperLUroot = $(HOME)/Dropbox/Codes/SuperLU/SuperLU
|
||||
-SUPERLULIB = $(SuperLUroot)/lib/libsuperlu_5.1.a
|
||||
+SuperLUroot = @superlu_home@
|
||||
+SUPERLULIB = @superlu_lib@
|
||||
|
||||
#BLASLIB = $(SuperLUroot)/lib/libblas.a
|
||||
|
||||
52
superlu-remove-mc64ad.patch
Normal file
52
superlu-remove-mc64ad.patch
Normal file
|
|
@ -0,0 +1,52 @@
|
|||
diff --git a/SRC/CMakeLists.txt b/SRC/CMakeLists.txt
|
||||
index 34c4aa4..7996af0 100644
|
||||
--- a/SRC/CMakeLists.txt
|
||||
+++ b/SRC/CMakeLists.txt
|
||||
@@ -23,7 +23,6 @@ set(sources
|
||||
ilu_relax_snode.c
|
||||
ilu_heap_relax_snode.c
|
||||
mark_relax.c
|
||||
- mc64ad.c
|
||||
qselect.c
|
||||
input_error.c
|
||||
dmach.c
|
||||
@@ -68,9 +67,7 @@ if(enable_single)
|
||||
smemory.c
|
||||
sutil.c
|
||||
smyblas2.c
|
||||
- sgsisx.c
|
||||
sgsitrf.c
|
||||
- sldperm.c
|
||||
ilu_sdrop_row.c
|
||||
ilu_ssnode_dfs.c
|
||||
ilu_scolumn_dfs.c
|
||||
@@ -118,9 +115,7 @@ if(enable_double)
|
||||
dmemory.c
|
||||
dutil.c
|
||||
dmyblas2.c
|
||||
- dgsisx.c
|
||||
dgsitrf.c
|
||||
- dldperm.c
|
||||
ilu_ddrop_row.c
|
||||
ilu_dsnode_dfs.c
|
||||
ilu_dcolumn_dfs.c
|
||||
@@ -171,9 +166,7 @@ if(enable_complex)
|
||||
cmemory.c
|
||||
cutil.c
|
||||
cmyblas2.c
|
||||
- cgsisx.c
|
||||
cgsitrf.c
|
||||
- cldperm.c
|
||||
ilu_cdrop_row.c
|
||||
ilu_csnode_dfs.c
|
||||
ilu_ccolumn_dfs.c
|
||||
@@ -222,9 +215,7 @@ if(enable_complex16)
|
||||
zmemory.c
|
||||
zutil.c
|
||||
zmyblas2.c
|
||||
- zgsisx.c
|
||||
zgsitrf.c
|
||||
- zldperm.c
|
||||
ilu_zdrop_row.c
|
||||
ilu_zsnode_dfs.c
|
||||
ilu_zcolumn_dfs.c
|
||||
391
superlu.changes
Normal file
391
superlu.changes
Normal file
|
|
@ -0,0 +1,391 @@
|
|||
-------------------------------------------------------------------
|
||||
Mon May 1 10:05:57 UTC 2023 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Fix broken magic in HPC module file. This has been broken since:
|
||||
Wed Apr 19 23:20:41 UTC 2023 - Christoph G <foss@grueninger.de>
|
||||
|
||||
- Fix two rpmlint warning.
|
||||
- Add rpmlintrc.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Apr 19 23:20:41 UTC 2023 - Christoph G <foss@grueninger.de>
|
||||
|
||||
- Fix two rpmlint warning.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Apr 16 07:22:44 UTC 2023 - Atri Bhattacharya <badshah400@gmail.com>
|
||||
|
||||
- Make doc and example packages noarch.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Apr 9 03:01:30 UTC 2023 - Christoph G <foss@grueninger.de>
|
||||
|
||||
- update to version 6.0.0
|
||||
* Add 64-bit indexing support, with mixed int and int64_t types.
|
||||
* Add METIS ordering option.
|
||||
* Add FORTRAN/CMakeLists.txt
|
||||
- Update and rename patch superlu-5.2-remove-mc64ad.patch to
|
||||
superlu-remove-mc64ad.patch
|
||||
- update superlu-examples_Makefile_remove_itersol.patch
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Sep 30 19:47:48 UTC 2021 - Antoine Ginies <aginies@suse.com>
|
||||
|
||||
- update to version 5.3.0 (JSC#SLE-22138)
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Jan 28 17:45:16 UTC 2021 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Change 'Requires:' to other HPC packages to %requires_eq to depend
|
||||
on the exact version. This should take care of HPC packages ignoring
|
||||
proper ABI versioning.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Nov 16 14:41:49 UTC 2020 - Ana Guerrero Lopez <aguerrero@suse.com>
|
||||
|
||||
- Fix package name, re-add lines removed by mistake.
|
||||
This fix duplicate binary names. (boo#1178840)
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Oct 26 14:11:13 UTC 2020 - Ana Guerrero Lopez <aguerrero@suse.com>
|
||||
|
||||
- New version 5.2.2 (boo#1178112)
|
||||
- bugfixes, documentation and examples update.
|
||||
- Update URL and Source0 and Source1, use get_tarball.sh to remove
|
||||
non distributable files.
|
||||
- Install superlu_ug.pdf provided by the tarball.
|
||||
- Remove patch, merged upstream
|
||||
* superlu-4.3-include.patch
|
||||
* superlu-4.3-dont-opt-away.diff
|
||||
* superlu-5.2-make.patch
|
||||
- Refresh patch:
|
||||
* superlu-examples_Makefile_remove_itersol.patch
|
||||
* superlu-make.linux.patch
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Sep 11 06:13:46 UTC 2020 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Add build support for gcc10 to HPC build (bsc#1174439).
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Feb 26 12:30:51 UTC 2020 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Add support for gcc8/9 building (jsc#SLE-8604).
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Feb 14 09:16:02 UTC 2019 - Jan Engelhardt <jengelh@inai.de>
|
||||
|
||||
- Fix the package group fix.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Feb 10 23:11:37 UTC 2019 - Egbert Eich <eich@suse.com>
|
||||
|
||||
- Fix dependencies.
|
||||
- Fix %%post and %%postun scripts for HPC.
|
||||
- Fix HPC modulefile.
|
||||
- Fix package groups.
|
||||
- Generate and add pkgconfig files.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Feb 8 10:50:43 UTC 2019 - eich@suse.com
|
||||
|
||||
- Set default module version correctly when installing
|
||||
master package, unset when deinstalling the default library
|
||||
package.
|
||||
- make example make.inc work with non-HPC builds as well.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Feb 8 09:40:33 UTC 2019 - Antoine Ginies <aginies@suse.com>
|
||||
|
||||
- Add superlu-examples_Makefile_remove_itersol.patch
|
||||
superlu-make.linux.patch:
|
||||
get a buildable examples test suite (bsc#1124765)
|
||||
fixing Makefile
|
||||
adding missing make.inc
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Jan 22 11:58:01 UTC 2019 - eich@suse.com
|
||||
|
||||
- Disable HPC builds for ring testing on Factory submissions.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Jan 21 15:09:13 UTC 2019 - eich@suse.com
|
||||
|
||||
- Fix a word in a comment.
|
||||
- Remove some colloquialism from a package description.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Jan 18 14:46:44 UTC 2019 - eich@suse.com
|
||||
|
||||
- Reenable ldconfig in %post and %postun for HPC but don't let it
|
||||
update the cache: this would be pointless for libraries in
|
||||
non-standard locations.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Jan 10 09:31:45 UTC 2019 - eich@suse.com
|
||||
|
||||
- Moved HPC module from devel to library package.
|
||||
- Modified summary for devel package.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Oct 26 19:55:59 UTC 2018 - eich@suse.com
|
||||
|
||||
- Add environment module support for HPC.
|
||||
* create baselib.conf on the fly.
|
||||
- Add superlu-5.2-make.patch:
|
||||
add compiler and build flags in make.inc.
|
||||
- Separate off documentation and examples to separate packages.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Jun 14 12:56:22 UTC 2016 - badshah400@gmail.com
|
||||
|
||||
- Use system blas by passing the cmake option
|
||||
-DUSE_XSDK_DEFAULTS='TRUE'.
|
||||
- Disable building tests for now because they have linking issues.
|
||||
- Use cmake macros wherever appropriate.
|
||||
- A minimum of cmake >= 2.8.12 is required for building.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun May 29 16:30:52 UTC 2016 - foss@grueninger.de
|
||||
|
||||
- Update to SuperLU 5.2.1
|
||||
- Switch to CMake as build-system
|
||||
- Drop superlu-4.3-disable-hsl.patch as CMake is now used
|
||||
- Update to latest SuperLU User Guide
|
||||
- superlu-4.3.diff, superlu-4.3-remove-hsl.patch: removed
|
||||
- superlu-5.2-remove-mc64ad.patch: new, routine was removed
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Jul 29 09:34:51 UTC 2015 - dimstar@opensuse.org
|
||||
|
||||
- Add baselibs.conf: build libsuperlu4-32bit, as needed by
|
||||
libarmadillo.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Jan 15 21:14:51 UTC 2013 - scorot@free.fr
|
||||
|
||||
- repackage original source tarball in order to remove the
|
||||
HSL mc64ad routine that caonnt be redistributed bnc#796236
|
||||
- add README.SUSE file in the %%doci in order to explain
|
||||
that change
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Jan 8 20:47:13 UTC 2013 - scorot@free.fr
|
||||
|
||||
- add patch superlu-4.3-disable-hsl.patch in order to disable HSL
|
||||
code from the library
|
||||
- update patch superlu-4.3.diff so that test routines are run
|
||||
against the shared library
|
||||
- build tests routines in %%check section
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Dec 18 22:21:27 UTC 2012 - scorot@free.fr
|
||||
|
||||
- Update to SuperLU 4.3:
|
||||
* Remove recursive DFS for postordering elimination tree in
|
||||
sp_coletree.c (The nonrecursive routine nr_etdfs() was
|
||||
contributed by Cedric Doucet, CEDRAT Group, Meylan, France.)
|
||||
* Make supermatrix.h the same for all three libraries
|
||||
* Include an on-line HTML documentation for the source code
|
||||
* Corrected backward error BERR formula when a component of the
|
||||
RHS and the residual are exactly zero
|
||||
* Change parameter "delta" to genmmd() from 1 to 0 in get_perm_c
|
||||
remove "static" declaration in EXAMPLE/xlinsolx*.c
|
||||
* Include threshold-based incomplete factorization (ILU)
|
||||
* Removed the static global variables so that it is thread-safe.
|
||||
* Make superlu_options_t{} structure and enum constants the same
|
||||
for both superlu & superlu_dist.
|
||||
* Replace qsort by "quick select" (qselect) in ILU's secondary
|
||||
dropping.
|
||||
* Replace mc64ad.f by mc64ad.c using f2c.
|
||||
* Bug fixes in ilu_sdrop_row.c.
|
||||
* Bug fixes in xgsisx.c, so that when mc64 permutation is used
|
||||
in ILU, the right-hand side is permuted properly.
|
||||
* Add parameter #7 in sp_ienv(), setting as the maxsuper for ILU
|
||||
code (smaller than parameter #3).
|
||||
* Update Users Guide.
|
||||
* Update doxygen code documentation.
|
||||
* Fix a bug in ILU driver routine dgsisx.c, so that on return,
|
||||
the initial row permutation is combined with perm_r[] from
|
||||
partial pivoting.
|
||||
* Modify 2 ILU examples: EXAMPLE/ditersol.c, EXAMPLE/ditersol1.c
|
||||
* Update superlu_timer.c
|
||||
- Remove unneeded patches
|
||||
+ superlu-overflow.patch : Applied upstream
|
||||
+ superlu-initialize.diff : Applied upstream
|
||||
+ superlu-undef-code.diff : Applied upstream
|
||||
- Updated patches
|
||||
+ superlu-4.3.diff
|
||||
+ superlu-4.3-include.patch
|
||||
+ superlu-4.3-dont-opt-away.diff
|
||||
- Build shared libraries
|
||||
- Put shared libs and devel files in separate packages
|
||||
- Use rpm macros instead of plain directory names
|
||||
- Add %%ckeck
|
||||
- Update documentation file %%source1 and put html and examples
|
||||
files in %%doc
|
||||
- Spec file reformating
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Jan 29 01:48:27 UTC 2012 - jengelh@medozas.de
|
||||
|
||||
- Remove redundant tags/sections per specfile guideline suggestions
|
||||
- Parallel building using %_smp_mflags
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Jun 22 18:18:46 CEST 2006 - ro@suse.de
|
||||
|
||||
- remove selfprovides
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Mar 27 02:23:29 CEST 2006 - garloff@suse.de
|
||||
|
||||
- superlu-undef-code.diff: Fix undefined code (#160443).
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Jan 25 21:41:53 CET 2006 - mls@suse.de
|
||||
|
||||
- converted neededforbuild to BuildRequires
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Dec 22 19:26:34 CET 2005 - garloff@suse.de
|
||||
|
||||
- Install header files into /usr/include/superlu/
|
||||
- Update User Guide.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Dec 21 13:33:20 CET 2005 - garloff@suse.de
|
||||
|
||||
- Include EXAMPLE dir as documentation.
|
||||
- Build as non-root.
|
||||
- Nuke unused local vars referencing uninitialized vars.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Dec 21 02:17:35 CET 2005 - garloff@suse.de
|
||||
|
||||
- Update to SuperLU-3.0: [#133821]
|
||||
* Added "options" input argument and "stat" output argument
|
||||
for the driver routines
|
||||
* More Examples
|
||||
* Added a "symmetric mode" for (nearly) symmetric matrices
|
||||
* Better Fortran interface.
|
||||
* fixed a bug in the complex drivers sgssvx/zgssvx when the
|
||||
input matrix is stored in compressed row format.
|
||||
* prefixed the header files by "slu_".
|
||||
* Fixed a memory leak in get_perm_c() when bnz=0.
|
||||
* Changed "abs" to "fabs" in izmax1.
|
||||
* Upgraded COLAMD to the latest version (2.3).15
|
||||
- Add various declarations and #include statements
|
||||
- Trick compiler into not optimizing away a loop in our timing
|
||||
measurement.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Nov 25 14:20:00 CET 2005 - yxu@suse.de
|
||||
|
||||
- add missing function prototypes
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Tue Nov 15 13:42:23 CET 2005 - dmueller@suse.de
|
||||
|
||||
- avoid an endless loop during building (#133820)
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon May 9 17:24:12 CEST 2005 - meissner@suse.de
|
||||
|
||||
- fixed 1 byte buffer overflows.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Dec 20 02:58:44 CET 2004 - garloff@suse.de
|
||||
|
||||
- Pass $(RPM_OPT_FLAGS) -Os -fPIC for files that don't need to be
|
||||
optimized.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sat Sep 6 19:31:26 CEST 2003 - garloff@suse.de
|
||||
|
||||
- Add -fPIC to allow inclusion in dynamic lib.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sun Aug 10 22:19:09 CEST 2003 - garloff@suse.de
|
||||
|
||||
- -O3 leads to an endless loop in dlamanch test on x86. Probably
|
||||
some compiler of FPU weirdness. Remove -O3 on x86 again.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Thu Aug 7 16:49:54 CEST 2003 - garloff@suse.de
|
||||
|
||||
- Adapt chown syntax to owner:group.
|
||||
- Reenable -O3 (compiler bug fixed?), but limit automatical
|
||||
inlining.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Jun 18 02:23:54 CEST 2003 - ro@suse.de
|
||||
|
||||
- added directory to filelist.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Aug 28 11:40:33 CEST 2002 - ro@suse.de
|
||||
|
||||
- remove -O3 from cflags (results in endless loop).
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed May 8 18:40:16 CEST 2002 - garloff@suse.de
|
||||
|
||||
- lib64 fix.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed May 8 15:52:24 MEST 2002 - garloff@suse.de
|
||||
|
||||
- Fix test scripts.
|
||||
- Use BuildRoot.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed May 8 13:59:11 MEST 2002 - garloff@suse.de
|
||||
|
||||
- Remove BLAS, Lapack.
|
||||
- Rename package into SuperLU.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Sat Apr 20 14:42:04 MEST 2002 - garloff@suse.de
|
||||
|
||||
- Disable -fast-math
|
||||
- In SuperLU, use CBLAS that ships with it
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Apr 19 20:17:57 MEST 2002 - garloff@suse.de
|
||||
|
||||
- Update to
|
||||
* CLAPACK-3.0
|
||||
* SuperLU-2.0
|
||||
- Added SuperLU user guide
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Fri Apr 19 20:17:23 MEST 2002 - garloff@suse.de
|
||||
|
||||
- Fixed compilation with gcc-3.1:
|
||||
link with -lfrtbegin (which contains main formerly in g2c)
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Apr 10 01:49:54 CEST 2002 - ro@suse.de
|
||||
|
||||
- fix owner for README.SuperLU
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Aug 7 22:12:27 CEST 2000 - garloff@suse.de
|
||||
|
||||
- Use %{_docdir} to put docu in the right place.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Aug 7 19:32:14 CEST 2000 - garloff@suse.de
|
||||
|
||||
- Add -mcpu=pentiumpro for i386
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Mon Sep 13 17:23:57 CEST 1999 - bs@suse.de
|
||||
|
||||
- ran old prepare_spec on spec file to switch to new prepare_spec.
|
||||
|
||||
-------------------------------------------------------------------
|
||||
Wed Sep 1 00:21:25 CEST 1999 - garloff@suse.de
|
||||
|
||||
- First creation of package.
|
||||
8
superlu.rpmlintrc
Normal file
8
superlu.rpmlintrc
Normal file
|
|
@ -0,0 +1,8 @@
|
|||
# In multibuild spec file names are expected to be different from source package names
|
||||
addFilter(".*-hpc.*: E: invalid-spec-name")
|
||||
# 'hidden' file names are standard for environment modules
|
||||
addFilter(".*: W: hidden-file-or-dir /usr/share/lmod/.*/.version.*")
|
||||
# Not a macro but the file magic for environment module files
|
||||
addFilter(".*: W: macro-in-comment %Module1")
|
||||
# Not a doc but an example package
|
||||
addFilter(".*-examples.noarch: W: package-with-huge-docs .*")
|
||||
298
superlu.spec
Normal file
298
superlu.spec
Normal file
|
|
@ -0,0 +1,298 @@
|
|||
#
|
||||
# spec file
|
||||
#
|
||||
# Copyright (c) 2023 SUSE LLC
|
||||
#
|
||||
# All modifications and additions to the file contributed by third parties
|
||||
# remain the property of their copyright owners, unless otherwise agreed
|
||||
# upon. The license for this file, and modifications and additions to the
|
||||
# file, is the same license as for the pristine package itself (unless the
|
||||
# license for the pristine package is not an Open Source License, in which
|
||||
# case the license is the MIT License). An "Open Source License" is a
|
||||
# license that conforms to the Open Source Definition (Version 1.9)
|
||||
# published by the Open Source Initiative.
|
||||
|
||||
# Please submit bugfixes or comments via https://bugs.opensuse.org/
|
||||
#
|
||||
|
||||
|
||||
%global flavor @BUILD_FLAVOR@%{nil}
|
||||
|
||||
# Base package name
|
||||
%define pname superlu
|
||||
%define ver 6.0.0
|
||||
%define _ver %(echo %{ver} | tr . _)
|
||||
|
||||
%if "%flavor" == ""
|
||||
ExclusiveArch: do_not_build
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "serial"
|
||||
%bcond_with hpc
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%undefine c_f_ver
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu7-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%undefine c_f_ver 7
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu8-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%define c_f_ver 8
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu9-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%define c_f_ver 9
|
||||
%endif
|
||||
|
||||
%if "%{flavor}" == "gnu10-hpc"
|
||||
%bcond_without hpc
|
||||
%global compiler_family gnu
|
||||
%define c_f_ver 10
|
||||
%endif
|
||||
|
||||
%bcond_with ringdisabled
|
||||
|
||||
%if %{with hpc} && %{with ringdisabled}
|
||||
ExclusiveArch: do_not_build
|
||||
%endif
|
||||
|
||||
%define package_name %pname
|
||||
%if %{without hpc}
|
||||
%define p_prefix %_prefix
|
||||
%define p_includedir %_includedir
|
||||
%define p_libdir %_libdir
|
||||
%define _sover 6
|
||||
%define libname lib%{name}%{?_sover}
|
||||
%else
|
||||
%{hpc_init -c %compiler_family %{?c_f_ver:-v %{c_f_ver}} %{?ext:-e %{ext}}}
|
||||
%define package_name %{hpc_package_name %_ver}
|
||||
%define p_prefix %hpc_prefix
|
||||
%define p_includedir %hpc_includedir
|
||||
%define p_libdir %hpc_libdir
|
||||
%define libname lib%{name}
|
||||
%endif
|
||||
|
||||
Name: %{package_name}
|
||||
Summary: A general purpose library for the direct solution of linear equations
|
||||
License: BSD-3-Clause
|
||||
Group: Productivity/Scientific/Math
|
||||
Version: %{ver}
|
||||
Release: 0
|
||||
URL: https://portal.nersc.gov/project/sparse/superlu/
|
||||
Source0: %{pname}-%{version}.tar.gz
|
||||
# Tarball above is generated with the script below
|
||||
Source1: get-tarball.sh
|
||||
Source2: README.SUSE
|
||||
Source3: superlu.rpmlintrc
|
||||
# PATCH-FIX-OPENSUSE superlu-remove-mc64ad.patch [bnc#796236]
|
||||
# The Harwell Subroutine Library (HSL) routine mc64ad.c have been removed
|
||||
# from the original sources for legal reasons. This patch disables the inclusion of
|
||||
# this routine in the library which, however, remains fully functional
|
||||
Patch3: superlu-remove-mc64ad.patch
|
||||
Patch4: superlu-examples_Makefile_remove_itersol.patch
|
||||
Patch5: superlu-make.linux.patch
|
||||
BuildRequires: cmake >= 2.8.12
|
||||
BuildRequires: fdupes
|
||||
BuildRequires: tcsh
|
||||
%if %{without hpc}
|
||||
BuildRequires: blas-devel
|
||||
BuildRequires: gcc-fortran
|
||||
%else
|
||||
Requires: %{compiler_family}%{?c_f_ver}-compilers-hpc
|
||||
BuildRequires: %{compiler_family}%{?c_f_ver}-compilers-hpc-macros-devel
|
||||
BuildRequires: libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel
|
||||
BuildRequires: suse-hpc >= 0.3
|
||||
%endif
|
||||
|
||||
%description
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
Documentation can be found in the %{name}-doc package or on
|
||||
http://www.netlib.org.
|
||||
|
||||
%package -n %libname
|
||||
Summary: SuperLU matrix solver
|
||||
Group: System/Libraries
|
||||
%if %{with hpc}
|
||||
%{requires_eq libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc}
|
||||
Requires: lua-lmod >= 7.6.1
|
||||
%hpc_requires
|
||||
%endif
|
||||
|
||||
%description -n %libname
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
%package devel
|
||||
Summary: Headers and development library for lib%{name}%{?_sover}
|
||||
Group: Development/Libraries/C and C++
|
||||
Requires: %libname = %version
|
||||
%if %{with hpc}
|
||||
%{requires_eq libopenblas%{?hpc_ext}-%{compiler_family}%{?c_f_ver}-hpc-devel}
|
||||
%hpc_requires_devel
|
||||
%endif
|
||||
Recommends: %name-doc
|
||||
|
||||
%description devel
|
||||
SuperLU headers and libraries files needed for development %{with_hpc:(HPC variant)}
|
||||
|
||||
%package doc
|
||||
Summary: Documentation for %name
|
||||
Group: Documentation/Other
|
||||
BuildArch: noarch
|
||||
|
||||
%description doc
|
||||
Documentation (HTML/PDF) for SuperLU.
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
%package examples
|
||||
Summary: Examples for %name
|
||||
Group: Documentation/Other
|
||||
Recommends: %name-devel
|
||||
BuildArch: noarch
|
||||
|
||||
%description examples
|
||||
Example programs for SuperLU.
|
||||
SuperLU is an algorithm that uses group theory to optimize LU
|
||||
decomposition of sparse matrices.
|
||||
|
||||
%if %{with hpc}
|
||||
%{hpc_master_package -l -L}
|
||||
%{hpc_master_package -L devel}
|
||||
%{hpc_master_package doc}
|
||||
%{hpc_master_package -L examples}
|
||||
%endif
|
||||
|
||||
%prep
|
||||
%setup -q -n superlu-%{version}
|
||||
%patch3 -p1
|
||||
%patch4 -p1
|
||||
%patch5 -p1
|
||||
cp %SOURCE2 ./
|
||||
# Create baselibs.conf dynamically (non-HPC build only).
|
||||
%if %{without hpc}
|
||||
cat > %{_sourcedir}/baselibs.conf <<EOF
|
||||
lib%{name}%{?_sover}
|
||||
EOF
|
||||
%endif
|
||||
|
||||
%build
|
||||
%{?hpc_setup}
|
||||
%if %{without hpc}
|
||||
%cmake \
|
||||
%else
|
||||
module load openblas
|
||||
%hpc_cmake \
|
||||
%endif
|
||||
-DCMAKE_BUILD_TYPE=Release -DUSE_XSDK_DEFAULTS='TRUE' -Denable_tests=OFF
|
||||
make %{?_smp_mflags}
|
||||
|
||||
%install
|
||||
%cmake_install
|
||||
#fix permissions
|
||||
chmod 644 MATLAB/* EXAMPLE/*
|
||||
|
||||
# remove all build examples
|
||||
cd EXAMPLE
|
||||
make clean
|
||||
rm -rf *itersol* .gitignore
|
||||
cd ..
|
||||
mv EXAMPLE examples
|
||||
cp MAKE_INC/make.linux examples/make.inc
|
||||
sed -i -e 's&@superlu_home@&%p_prefix&' -e 's&@superlu_lib@&%p_libdir&' examples/make.inc
|
||||
rm -f examples/.gitignore
|
||||
cp FORTRAN/README README.fortran
|
||||
%fdupes -s examples
|
||||
|
||||
%if %{with hpc}
|
||||
%{hpc_write_pkgconfig}
|
||||
|
||||
# TODO: is there any path to add for Matlab files?
|
||||
%hpc_write_modules_files
|
||||
#%Module1.0#####################################################################
|
||||
proc ModulesHelp { } {
|
||||
|
||||
puts stderr " "
|
||||
puts stderr "This module loads the SuperLU library built with the %{compiler_family} compiler"
|
||||
puts stderr "toolchain."
|
||||
puts stderr " "
|
||||
puts stderr "Note that this build of SuperLU leverages the OpenBLAS linear algebra libraries."
|
||||
puts stderr "Consequently, openblas is loaded automatically with this module."
|
||||
|
||||
puts stderr "\nVersion %{version}\n"
|
||||
|
||||
}
|
||||
module-whatis "Name: %{pname} built with %{compiler_family} compiler"
|
||||
module-whatis "Version: %{version}"
|
||||
module-whatis "Category: runtime library"
|
||||
module-whatis "Description: %{SUMMARY}"
|
||||
module-whatis "%{url}"
|
||||
|
||||
set version %{version}
|
||||
|
||||
depends-on openblas
|
||||
|
||||
if {[file isdirectory %{hpc_includedir}]} {
|
||||
prepend-path INCLUDE %{hpc_includedir}
|
||||
}
|
||||
prepend-path LD_LIBRARY_PATH %{hpc_libdir}
|
||||
|
||||
setenv %{hpc_PNAME %pname}_DIR %{hpc_prefix}
|
||||
if {[file isdirectory %{hpc_includedir}]} {
|
||||
setenv %{hpc_PNAME %pname}_INC %{hpc_includedir}
|
||||
%hpc_modulefile_add_pkgconfig_path
|
||||
}
|
||||
setenv %{hpc_PNAME %pname}_LIB %{hpc_libdir}
|
||||
|
||||
EOF
|
||||
%endif
|
||||
|
||||
%if %{without hpc}
|
||||
%post -n %libname -p /sbin/ldconfig
|
||||
%postun -n %libname -p /sbin/ldconfig
|
||||
%else
|
||||
|
||||
%post -n %libname
|
||||
/sbin/ldconfig -N %hpc_libdir
|
||||
|
||||
%postun -n %libname
|
||||
/sbin/ldconfig -N %hpc_libdir
|
||||
%hpc_module_delete_if_default
|
||||
%endif
|
||||
|
||||
%files -n %libname
|
||||
%doc README MATLAB README.SUSE
|
||||
%{?with_hpc:%hpc_dirs}
|
||||
%{?with_hpc:%hpc_modules_files}
|
||||
%{p_libdir}/*.so.*
|
||||
|
||||
%files devel
|
||||
%doc README.fortran
|
||||
%{?with_hpc:%{hpc_pkgconfig_file}}
|
||||
%{p_includedir}/%{!?with_hpc:*}
|
||||
%{p_libdir}/*.so
|
||||
%dir %{p_libdir}/cmake/
|
||||
%dir %{p_libdir}/cmake/superlu/
|
||||
%{p_libdir}/cmake/superlu/*.cmake
|
||||
%{p_libdir}/pkgconfig/superlu.pc
|
||||
|
||||
%files doc
|
||||
%doc DOC/html DOC/ug.pdf
|
||||
|
||||
%files examples
|
||||
%doc examples
|
||||
|
||||
%changelog
|
||||
Loading…
Reference in New Issue
Block a user