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Accepting request 489881 from devel:languages:R:released

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- upstream update to 3.4.0
  CHANGES IN R 3.4.0:
  SIGNIFICANT USER-VISIBLE CHANGES:
   * (Unix-alike) The default methods for download.file() and url()
     now choose "libcurl" except for file:// URLs.  There will be
     small changes in the format and wording of messages, including in
     rare cases if an issue is a warning or an error.  For example,
     when HTTP re-direction occurs, some messages refer to the final
     URL rather than the specified one.
     Those who use proxies should check that their settings are
     compatible (see ?download.file: the most commonly used forms work
     for both "internal" and "libcurl").
   * table() has been amended to be more internally consistent and
     become back compatible to R <= 2.7.2 again.  Consequently,
     table(1:2, exclude = NULL) no longer contains a zero count for
     <NA>, but useNA = "always" continues to do so.
   * summary.default() no longer rounds, but its print method does
     resulting in less extraneous rounding, notably of numbers in the
     ten thousands.
   * factor(x, exclude = L) behaves more rationally when x or L are
     character vectors.  Further, exclude = <factor> now behaves as
     documented for long.
   * Arithmetic, logic (&, |) and comparison (aka 'relational', e.g.,
     <, ==) operations with arrays now behave consistently, notably
     for arrays of length zero.
     Arithmetic between length-1 arrays and longer non-arrays had
     silently dropped the array attributes and recycled.  This now
     gives a warning and will signal an error in the future, as it has
     always for logic and comparison operations in these cases (e.g.,
     compare matrix(1,1) + 2:3 and matrix(1,1) < 2:3).

OBS-URL: https://build.opensuse.org/request/show/489881
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/R-base?expand=0&rev=53
This commit is contained in:
Dominique Leuenberger
2017-04-24 07:50:18 +00:00
committed by Git OBS Bridge
parent 5ce5702594 d6d2a6e0c0
commit 45055c2f10
4 changed files with 569 additions and 48 deletions
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@@ -1,3 +1,558 @@
-------------------------------------------------------------------
Fri Apr 21 17:11:31 UTC 2017 - detlef.steuer@gmx.de
- upstream update to 3.4.0
CHANGES IN R 3.4.0:
SIGNIFICANT USER-VISIBLE CHANGES:
* (Unix-alike) The default methods for download.file() and url()
now choose "libcurl" except for file:// URLs. There will be
small changes in the format and wording of messages, including in
rare cases if an issue is a warning or an error. For example,
when HTTP re-direction occurs, some messages refer to the final
URL rather than the specified one.
Those who use proxies should check that their settings are
compatible (see ?download.file: the most commonly used forms work
for both "internal" and "libcurl").
* table() has been amended to be more internally consistent and
become back compatible to R <= 2.7.2 again. Consequently,
table(1:2, exclude = NULL) no longer contains a zero count for
<NA>, but useNA = "always" continues to do so.
* summary.default() no longer rounds, but its print method does
resulting in less extraneous rounding, notably of numbers in the
ten thousands.
* factor(x, exclude = L) behaves more rationally when x or L are
character vectors. Further, exclude = <factor> now behaves as
documented for long.
* Arithmetic, logic (&, |) and comparison (aka 'relational', e.g.,
<, ==) operations with arrays now behave consistently, notably
for arrays of length zero.
Arithmetic between length-1 arrays and longer non-arrays had
silently dropped the array attributes and recycled. This now
gives a warning and will signal an error in the future, as it has
always for logic and comparison operations in these cases (e.g.,
compare matrix(1,1) + 2:3 and matrix(1,1) < 2:3).
* The JIT ('Just In Time') byte-code compiler is now enabled by
default at its level 3. This means functions will be compiled on
first or second use and top-level loops will be compiled and then
run. (Thanks to Tomas Kalibera for extensive work to make this
possible.)
For now, the compiler will not compile code containing explicit
calls to browser(): this is to support single stepping from the
browser() call.
JIT compilation can be disabled for the rest of the session using
compiler::enableJIT(0) or by setting environment variable
R_ENABLE_JIT to 0.
* xtabs() works more consistently with NAs, also in its result no
longer setting them to 0. Further, a new logical option addNA
allows to count NAs where appropriate. Additionally, for the
case sparse = TRUE, the result's dimnames are identical to the
default case's.
* Matrix products now consistently bypass BLAS when the inputs have
NaN/Inf values. Performance of the check of inputs has been
improved. Performance when BLAS is used is improved for
matrix/vector and vector/matrix multiplication (DGEMV is now used
instead of DGEMM).
One can now choose from alternative matrix product
implementations _via_ options(matprod = ). The "internal"
implementation is not optimized for speed but consistent in
precision with other summations in R (using long double
accumulators where available). "blas" calls BLAS directly for
best speed, but usually with undefined behavior for inputs with
NaN/Inf.
* factor() now uses order() to sort its levels, not sort.list().
This makes factor() support custom vector-like objects if methods
for the appropriate generics are defined. This change has the
side effect of making factor() succeed on empty or length-one
non-atomic vector(-like) types (e.g., list), where it failed
before.
NEW FEATURES:
* User errors such as integrate(f, 0:1, 2) are now caught.
* Add signature argument to debug(), debugonce(), undebug() and
isdebugged() for more conveniently debugging S3 and S4 methods.
(Based on a patch by Gabe Becker.)
* Add utils::debugcall() and utils::undebugcall() for debugging the
function that would be called by evaluating the given expression.
When the call is to an S4 generic or standard S3 generic,
debugcall() debugs the method that would be dispatched. A number
of internal utilities were added to support this, most notably
utils::isS3stdGeneric(). (Based on a patch by Gabe Becker.)
* Add utils::strcapture(). Given a character vector and a regular
expression containing capture expressions, strcapture() will
extract the captured tokens into a tabular data structure,
typically a data.frame.
* str() and strOptions() get a new option drop.deparse.attr with
improved but _changed_ default behaviour for expressions. For
expression objects x, str(x) now may remove extraneous white
space and truncate long lines.
* str(<looooooooong_string>) is no longer very slow; inspired by
Mikko Korpela's proposal in PR#16527.
* str(x)'s default method is more "accurate" and hence somewhat
more generous in displaying character vectors; this will
occasionally change R outputs (and need changes to some
*.Rout(.save) files).
For a classed integer vector such as x <- xtabs(~ c(1,9,9,9)),
str(x) now shows both the class and "int", instead of only the
latter.
* isSymmetric(m) is much faster for large asymmetric matrices m
_via_ pre-tests and a new option tol1 (with which strict back
compatibility is possible but not the default).
* The result of eigen() now is of class "eigen" in the default case
when eigenvectors are computed.
* Zero-length date and date-time objects (of classes "POSIX[cl]?t")
now print() "recognizably".
* xy.coords() and xyz.coords() get a new setLab option.
* The method argument of sort.list(), order() and sort.int() gains
an "auto" option (the default) which should behave the same as
before when method was not supplied.
* stopifnot(E, ..) now reports differences when E is a call to
all.equal() and that is not true.
* boxplot(<formula>, *) gain optional arguments drop, sep, and
lex.order to pass to split.default() which itself gains an
argument lex.order to pass to interaction() for more flexibility.
* The plot() method for ppr() has enhanced default labels (xmin and
main).
* sample.int() gains an explicit useHash option (with a back
compatible default).
* identical() gains an ignore.srcref option which drops "srcref"
and similar attributes when true (as by default).
* diag(x, nrow = n) now preserves typeof(x), also for logical,
integer and raw x (and as previously for complex and numeric).
* smooth.spline() now allows direct specification of lambda, gets a
hatvalues() method and keeps tol in the result, and optionally
parts of the internal matrix computations.
* addNA() is faster now, e.g. when applied twice. (Part of
PR#16895.)
* New option rstandard(<lm>, type = "predicted") provides the
"PRESS"-related leave-one-out cross-validation errors for linear
models.
* After seven years of deprecation, duplicated factor levels now
produce a warning when printed and an error in levels<- instead
of a warning.
* Invalid factors, e.g., with duplicated levels (invalid but
constructable) now give a warning when printed, _via_ new
function .valid.factor().
* sessionInfo() has been updated for Apple's change in OS naming as
from '10.12' ('macOS Sierra' _vs_ 'OS X El Capitan').
Its toLatex() method now includes the running component.
* options(interrupt=) can be used to specify a default action for
user interrupts. For now, if this option is not set and the
error option is set, then an unhandled user interrupt invokes the
error option. (This may be dropped in the future as interrupt
conditions are not error conditions.)
* In most cases user interrupt handlers will be called with a
"resume" restart available. Handlers can invoke this restart to
resume computation. At the browser prompt the r command will
invoke a "resume" restart if one is available. Some read
operations cannot be resumed properly when interrupted and do not
provide a "resume" restart.
* Radix sort is now chosen by method = "auto" for sort.int() for
double vectors (and hence used for sort() for unclassed double
vectors), excluding 'long' vectors.
sort.int(method = "radix") no longer rounds double vectors.
* The default and data.frame methods for stack() preserve the names
of empty elements in the levels of the ind column of the return
value. Set the new drop argument to TRUE for the previous
behavior.
* Speedup in simplify2array() and hence sapply() and mapply() (for
the case of names and common length > 1), thanks to Suharto
Anggono's PR#17118.
* table(x, exclude = NULL) now sets useNA = "ifany" (instead of
"always"). Together with the bug fixes for this case, this
recovers more consistent behaviour compatible to older versions
of R. As a consequence, summary() for a logical vector no longer
reports (zero) counts for NA when there are no NAs.
* dump.frames() gets a new option include.GlobalEnv which allows to
also dump the global environment, thanks to Andreas Kersting's
proposal in PR#17116.
* system.time() now uses message() instead of cat() when terminated
early, such that suppressMessages() has an effect; suggested by
Ben Bolker.
* citation() supports inst/CITATION files from package source
trees, with lib.loc pointing to the directory containing the
package.
* try() gains a new argument outFile with a default that can be
modified _via_ options(try.outFile = .), useful notably for
Sweave.
* The unexported low-level functions in package parallel for
passing serialized R objects to and from forked children now
support long vectors on 64-bit platforms. This removes some
limits on higher-level functions such as mclapply() (but
returning gigabyte results from forked processes _via_
serialization should be avoided if at all possible).
* Connections now print() without error even if invalid, e.g. after
having been destroyed.
* apropos() and find(simple.words = FALSE) no longer match object
names starting with . which are known to be internal objects
(such as .__S3MethodsTable__.).
* Convenience function hasName() has been added; it is intended to
replace the common idiom !is.null(x$name) without the usually
unintended partial name matching.
* strcapture() no longer fixes column names nor coerces strings to
factors (suggested by Bill Dunlap).
* strcapture() returns NA for non-matching values in x (suggested
by Bill Dunlap).
* source() gets new optional arguments, notably exprs; this is made
use of in the new utility function withAutoprint().
* sys.source() gets a new toplevel.env argument. This argument is
useful for frameworks running package tests; contributed by Tomas
Kalibera.
* Sys.setFileTime() and file.copy(copy.date = TRUE) will set
timestamps with fractions of seconds on platforms/filesystems
which support this.
* (Windows only.) file.info() now returns file timestamps including
fractions of seconds; it has done so on other platforms since R
2.14.0. (NB: some filesystems do not record modification and
access timestamps to sub-second resolution.)
* The license check enabled by options(checkPackageLicense = TRUE)
is now done when the package's namespace is first loaded.
* ppr() and supsmu() get an optional trace argument, and ppr(..,
sm.method = ..spline) is no longer limited to sample size n <=
2500.
* The POSIXct method for print() gets optional tz and usetz
arguments, thanks to a report from Jennifer S. Lyon.
* New function check_packages_in_dir_details() in package tools for
analyzing package-check log files to obtain check details.
* Package tools now exports function CRAN_package_db() for
obtaining information about current packages in the CRAN package
repository, and several functions for obtaining the check status
of these packages.
* The (default) Stangle driver Rtangle allows annotate to be a
function and gets a new drop.evalFALSE option.
* The default method for quantile(x, prob) should now be monotone
in prob, even in border cases, see PR#16672.
* bug.report() now tries to extract an email address from a
BugReports field, and if there is none, from a Contacts field.
* The format() and print() methods for object.size() results get
new options standard and digits; notably, standard = "IEC" and
standard = "SI" allow more standard (but less common)
abbreviations than the default ones, e.g. for kilobytes. (From
contributions by Henrik Bengtsson.)
* If a reference class has a validity method, validObject will be
called automatically from the default initialization method for
reference classes.
* tapply() gets new option default = NA allowing to change the
previously hardcoded value.
* read.dcf() now consistently interprets any 'whitespace' to be
stripped to include newlines.
* The maximum number of DLLs that can be loaded into R e.g. _via_
dyn.load() can now be increased by setting the environment
variable R_MAX_NUM_DLLS before starting R.
* Assigning to an element of a vector beyond the current length now
over-allocates by a small fraction. The new vector is marked
internally as growable, and the true length of the new vector is
stored in the truelength field. This makes building up a vector
result by assigning to the next element beyond the current length
more efficient, though pre-allocating is still preferred. The
implementation is subject to change and not intended to be used
in packages at this time.
* Loading the parallel package namespace no longer sets or changes
the .Random.seed, even if R_PARALLEL_PORT is unset.
NB: This can break reproducibility of output, and did for a CRAN
package.
* Methods "wget" and "curl" for download.file() now give an R error
rather than a non-zero return value when the external command has
a non-zero status.
* Encoding name "utf8" is mapped to "UTF-8". Many implementations
of iconv accept "utf8", but not GNU libiconv (including the late
2016 version 1.15).
* sessionInfo() shows the full paths to the library or executable
files providing the BLAS/LAPACK implementations currently in use
(not available on Windows).
* The binning algorithm used by bandwidth selectors bw.ucv(),
bw.bcv() and bw.SJ() switches to a version linear in the input
size n for n > nb/2. (The calculations are the same, but for
larger n/nb it is worth doing the binning in advance.)
* There is a new option PCRE_study which controls when grep(perl =
TRUE) and friends 'study' the compiled pattern. Previously this
was done for 11 or more input strings: it now defaults to 10 or
more (but most examples need many more for the difference from
studying to be noticeable).
* grep(perl = TRUE) and friends can now make use of PCRE's
Just-In-Time mechanism, for PCRE >= 8.20 on platforms where JIT
is supported. It is used by default whenever the pattern is
studied (see the previous item). (Based on a patch from Mikko
Korpela.)
This is controlled by a new option PCRE_use_JIT.
Note that in general this makes little difference to the speed,
and may take a little longer: its benefits are most evident on
strings of thousands of characters. As a side effect it reduces
the chances of C stack overflow in the PCRE library on very long
strings (millions of characters, but see next item).
Warning: segfaults were seen using PCRE with JIT enabled on
64-bit Sparc builds.
* There is a new option PCRE_limit_recursion for grep(perl = TRUE)
and friends to set a recursion limit taking into account R's
estimate of the remaining C stack space (or 10000 if that is not
available). This reduces the chance of C stack overflow, but
because it is conservative may report a non-match (with a
warning) in examples that matched before. By default it is
enabled if any input string has 1000 or more bytes. (PR#16757)
* getGraphicsEvent() now works on X11(type = "cairo") devices.
Thanks to Frederick Eaton (for reviving an earlier patch).
* There is a new argument onIdle for getGraphicsEvent(), which
allows an R function to be run whenever there are no pending
graphics events. This is currently only supported on X11
devices. Thanks to Frederick Eaton.
* The deriv() and similar functions now can compute derivatives of
log1p(), sinpi() and similar one-argument functions, thanks to a
contribution by Jerry Lewis.
* median() gains a formal ... argument, so methods with extra
arguments can be provided.
* strwrap() reduces indent if it is more than half width rather
than giving an error. (Suggested by Bill Dunlap.)
* When the condition code in if(.) or while(.) is not of length
one, an error instead of a warning may be triggered by setting an
environment variable, see the help page.
* Formatting and printing of bibliography entries (bibentry) is
more flexible and better documented. Apart from setting
options(citation.bibtex.max = 99) you can also use
print(<citation>, bibtex=TRUE) (or format(..)) to get the BibTeX
entries in the case of more than one entry. This also affects
citation(). Contributions to enable style = "html+bibtex" are
welcome.
C-LEVEL FACILITIES:
* Entry points R_MakeExternalPtrFn and R_ExternalPtrFn are now
declared in header Rinternals.h to facilitate creating and
retrieving an R external pointer from a C function pointer
without ISO C warnings about the conversion of function pointers.
* There was an exception for the native Solaris C++ compiler to the
dropping (in R 3.3.0) of legacy C++ headers from headers such as
R.h and Rmath.h - this has now been removed. That compiler has
strict C++98 compliance hence does not include extensions in its
(non-legacy) C++ headers: some packages will need to request
C++11 or replace non-C++98 calls such as lgamma: see SS1.6.4 of
'Writing R Extensions'.
Because it is needed by about 70 CRAN packages, headers R.h and
Rmath.h still declare
use namespace std;
when included on Solaris.
* When included from C++, the R headers now use forms such as
std::FILE directly rather than including the line
using std::FILE;
C++ code including these headers might be relying on the latter.
* Headers R_ext/BLAS.h and R_ext/Lapack.h have many improved
declarations including const for double-precision complex
routines. _Inter alia_ this avoids warnings when passing 'string
literal' arguments from C++11 code.
* Headers for Unix-only facilities R_ext/GetX11Image.h,
R_ext/QuartzDevice.h and R_ext/eventloop.h are no longer
installed on Windows.
* No-longer-installed headers GraphicsBase.h, RGraphics.h,
Rmodules/RX11.h and Rmodules/Rlapack.h which had a LGPL license
no longer do so.
* HAVE_UINTPTR_T is now defined where appropriate by Rconfig.h so
that it can be included before Rinterface.h when CSTACK_DEFNS is
defined and a C compiler (not C++) is in use. Rinterface.h now
includes C header stdint.h or C++11 header cstdint where needed.
* Package tools has a new function
package_native_routine_registration_skeleton() to assist adding
native-symbol registration to a package. See its help and SS5.4.1
of 'Writing R Extensions' for how to use it. (At the time it was
added it successfully automated adding registration to over 90%
of CRAN packages which lacked it. Many of the failures were
newly-detected bugs in the packages, e.g. 50 packages called
entry points with varying numbers of arguments and 65 packages
called entry points not in the package.)
INSTALLATION on a UNIX-ALIKE:
* readline headers (and not just the library) are required unless
configuring with --with-readline=no.
* configure now adds a compiler switch for C++11 code, even if the
compiler supports C++11 by default. (This ensures that g++ 6.x
uses C++11 mode and not its default mode of C++14 with 'GNU
extensions'.)
The tests for C++11 compliance are now much more comprehensive.
For gcc < 4.8, the tests from R 3.3.0 are used in order to
maintain the same behaviour on Linux distributions with long-term
support.
* An alternative compiler for C++11 is now specified with CXX11,
not CXX1X. Likewise C++11 flags are specified with CXX11FLAGS and
the standard (e.g., -std=gnu++11 is specified with CXX11STD.
* configure now tests for a C++14-compliant compiler by testing
some basic features. This by default tries flags for the
compiler specified by CXX11, but an alternative compiler, options
and standard can be specified by variables CXX14, CXX14FLAGS and
CXX14STD (e.g., -std=gnu++14).
* There is a new macro CXXSTD to help specify the standard for C++
code, e.g. -std=c++98. This makes it easier to work with
compilers which default to a later standard: for example, with
CXX=g++6 CXXSTD=-std=c++98 configure will select commands for g++
6.x which conform to C++11 and C++14 where specified but
otherwise use C++98.
* Support for the defunct IRIX and OSF/1 OSes and Alpha CPU has
been removed.
* configure checks that the compiler specified by $CXX $CXXFLAGS is
able to compile C++ code.
* configure checks for the required header sys/select.h (or
sys/time.h on legacy systems) and system call select and aborts
if they are not found.
* If available, the POSIX 2008 system call utimensat will be used
by Sys.setFileTime() and file.copy(copy.date = TRUE). This may
result in slightly more accurate file times. (It is available on
Linux and FreeBSD but not macOS.)
* The minimum version requirement for libcurl has been reduced to
7.22.0, although at least 7.28.0 is preferred and earlier
versions are little tested. (This is to support Debian 7
'Wheezy' LTS and Ubuntu 'Precise' 12.04 LTS, although the latter
is close to end-of-life.)
* configure tests for a C++17-compliant compiler. The tests are
experimental and subject to change in the future.
INCLUDED SOFTWARE:
* (Windows only) Tcl/Tk version 8.6.4 is now included in the binary
builds. The tcltk*.chm help file is no longer included; please
consult the online help at <URL: http://www.tcl.tk/man/> instead.
* The version of LAPACK included in the sources has been updated to
3.7.0: no new routines have been added to R.
PACKAGE INSTALLATION:
* There is support for compiling C++14 or C++17 code in packages on
suitable platforms: see 'Writing R Extensions' for how to request
this.
* The order of flags when LinkingTo other packages has been changed
so their include directories come earlier, before those specified
in CPPFLAGS. This will only have an effect if non-system include
directories are included with -I flags in CPPFLAGS (and so not
the default -I/usr/local/include which is treated as a system
include directory on most platforms).
* Packages which register native routines for .C or .Fortran need
to be re-installed for this version (unless installed with
R-devel SVN revision r72375 or later).
* Make variables with names containing CXX1X are deprecated in
favour of those using CXX11, but for the time being are still
made available _via_ file etc/Makeconf. Packages using them
should be converted to the new forms and made dependent on R (>=
3.4.0).
-------------------------------------------------------------------
Tue Apr 18 08:27:14 UTC 2017 - detlef.steuer@gmx.de

56
R-base.spec
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@@ -19,7 +19,7 @@
%define release 1
Name: R-base
Version: 3.3.3
Version: 3.4.0
Release: %release
%define Rversion %{version}
Source: R-%{version}.tar.bz2
@@ -723,8 +723,6 @@ This package provides R-methods, one of R-core packages.
%lang(zh_CN) %{_libdir}/R/library/translations/zh_CN/LC_MESSAGES/R-methods.mo
%lang(zh_CN) %{_libdir}/R/library/translations/zh_CN/LC_MESSAGES/methods.mo
# parallel
%package -n R-parallel
Summary: Package providing R-parallel
Group: Development/Libraries/Other
@@ -746,6 +744,7 @@ This package provides R-parallel, one of R-core packages.
%{_libdir}/R/library/parallel/doc/parallel.Rnw
%dir %{_libdir}/R/library/parallel/Meta
%{_libdir}/R/library/parallel/Meta/Rd.rds
%{_libdir}/R/library/parallel/Meta/features.rds
%{_libdir}/R/library/parallel/Meta/hsearch.rds
%{_libdir}/R/library/parallel/Meta/links.rds
%{_libdir}/R/library/parallel/Meta/nsInfo.rds
@@ -1080,11 +1079,10 @@ Metapackage, Requires: all recommended Packages
%files -n R-recommended-packages
# boot
%package -n R-boot
Summary: Package provides recommended R-boot
Group: Development/Libraries/Other
Version: 1.3.18
Version: 1.3.19
Release: %release
Requires: R-base
@@ -1113,8 +1111,6 @@ This packages provides R-boot, one of the recommended packages.
%lang(ru) %{_libdir}/R/library/boot/po/ru/
%{_libdir}/R/library/boot/R/
#class
%package -n R-class
Summary: Package provides recommended R-class
Group: Development/Libraries/Other
@@ -1135,7 +1131,6 @@ This packages provides R-class, one of the recommended packages.
%{_libdir}/R/library/class/html/
%{_libdir}/R/library/class/INDEX
%{_libdir}/R/library/class/libs/
#{_libdir}/R/library/class/LICENCE
%{_libdir}/R/library/class/Meta/
%{_libdir}/R/library/class/NAMESPACE
%{_libdir}/R/library/class/NEWS
@@ -1148,11 +1143,10 @@ This packages provides R-class, one of the recommended packages.
%lang(pl) %{_libdir}/R/library/class/po/pl/
%{_libdir}/R/library/class/R/
#cluster
%package -n R-cluster
Summary: Package provides recommended R-cluster
Group: Development/Libraries/Other
Version: 2.0.5
Version: 2.0.6
Release: %release
Requires: R-base
@@ -1181,8 +1175,6 @@ This packages provides R-cluster, one of the recommended packages.
%lang(ko) %{_libdir}/R/library/cluster/po/ko/
%lang(pl) %{_libdir}/R/library/cluster/po/pl/
#codetools
%package -n R-codetools
Summary: Package provides recommended R-codetools
Group: Development/Libraries/Other
@@ -1205,8 +1197,6 @@ This packages provides R-codetools, one of the recommended packages.
%{_libdir}/R/library/codetools/NAMESPACE
%{_libdir}/R/library/codetools/R/
# foreign
%package -n R-foreign
Summary: Package provides recommended R-foreign
Group: Development/Libraries/Other
@@ -1237,8 +1227,6 @@ This packages provides R-foreign, one of the recommended packages.
%lang(pl) %{_libdir}/R/library/foreign/po/pl/
%{_libdir}/R/library/foreign/R/
# KernSmooth
%package -n R-KernSmooth
Summary: Package provides recommended R-KernSmooth
Group: Development/Libraries/Other
@@ -1268,12 +1256,10 @@ This packages provides R-KernSmooth, one of the recommended packages.
%lang(ko) %{_libdir}/R/library/KernSmooth/po/ko/
%{_libdir}/R/library/KernSmooth/R/
# lattice
%package -n R-lattice
Summary: Package provides recommended R-lattice
Group: Development/Libraries/Other
Version: 0.20.34
Version: 0.20.35
Release: %release
Requires: R-base
@@ -1303,12 +1289,10 @@ This packages provides R-lattice, one of the recommended packages.
%lang(pl) %{_libdir}/R/library/lattice/po/pl/
%{_libdir}/R/library/lattice/R/
# MASS
%package -n R-MASS
Summary: Package provides recommended R-MASS
Group: Development/Libraries/Other
Version: 7.3.45
Version: 7.3.47
Release: %release
Requires: R-base
@@ -1326,7 +1310,6 @@ This packages provides R-MASS, one of the recommended packages.
%{_libdir}/R/library/MASS/html/
%{_libdir}/R/library/MASS/INDEX
%{_libdir}/R/library/MASS/libs/
#{_libdir}/R/library/MASS/LICENCE
%{_libdir}/R/library/MASS/Meta/
%{_libdir}/R/library/MASS/NAMESPACE
%{_libdir}/R/library/MASS/NEWS
@@ -1339,12 +1322,10 @@ This packages provides R-MASS, one of the recommended packages.
%{_libdir}/R/library/MASS/R/
%{_libdir}/R/library/MASS/scripts/
# Matrix
%package -n R-Matrix
Summary: Package provides recommended R-Matrix
Group: Development/Libraries/Other
Version: 1.2.8
Version: 1.2.9
Release: %release
Requires: R-base
@@ -1383,7 +1364,7 @@ This packages provides R-Matrix, one of the recommended packages.
%package -n R-Matrix-devel
Summary: Package provides header files for recommended R-Matrix
Group: Development/Libraries/Other
Version: 1.2.7.1
Version: 1.2.9
Release: %release
Requires: R-Matrix
Requires: R-base
@@ -1399,8 +1380,6 @@ Package provides header files for recommended R-Matrix
%{_libdir}/R/library/Matrix/include/Matrix_stubs.c
%{_libdir}/R/library/Matrix/include/cholmod.h
# mgcv
%package -n R-mgcv
Summary: Package provides recommended R-mgcv
Group: Development/Libraries/Other
@@ -1414,7 +1393,6 @@ This packages provides R-mgcv, one of the recommended packages.
%files -n R-mgcv
%defattr(-, root, root)
# mgcv
%dir %{_libdir}/R/library/mgcv/
%{_libdir}/R/library/mgcv/CITATION
%{_libdir}/R/library/mgcv/DESCRIPTION
@@ -1433,8 +1411,6 @@ This packages provides R-mgcv, one of the recommended packages.
%lang(ko) %{_libdir}/R/library/mgcv/po/ko/
%lang(pl) %{_libdir}/R/library/mgcv/po/pl/
# nlme
%package -n R-nlme
Summary: Package provides recommended R-nlme
Group: Development/Libraries/Other
@@ -1469,8 +1445,6 @@ This packages provides R-nlme, one of the recommended packages.
%{_libdir}/R/library/nlme/R/
%{_libdir}/R/library/nlme/scripts/
# nnet
%package -n R-nnet
Summary: Package provides recommended R-nnet
Group: Development/Libraries/Other
@@ -1502,12 +1476,10 @@ This packages provides R-nnet, one of the recommended packages.
%lang(pl) %{_libdir}/R/library/nnet/po/pl/
%{_libdir}/R/library/nnet/R/
# rpart = 4.1.10
%package -n R-rpart
Summary: Package provides recommended R-rpart
Group: Development/Libraries/Other
Version: 4.1.10
Version: 4.1.11
Release: %release
Requires: R-base
@@ -1517,7 +1489,6 @@ This packages provides R-rpart, one of the recommended packages.
%files -n R-rpart
%defattr(-, root, root)
# rpart
%dir %{_libdir}/R/library/rpart/
%{_libdir}/R/library/rpart/data/
%{_libdir}/R/library/rpart/doc/
@@ -1538,12 +1509,10 @@ This packages provides R-rpart, one of the recommended packages.
%lang(ru) %{_libdir}/R/library/rpart/po/ru/
%{_libdir}/R/library/rpart/R/
# spatial
%package -n R-spatial
Summary: Package provides recommended R-spatial
Group: Development/Libraries/Other
Version: 7.3.11
Version: 7.3.12
Release: %release
Requires: R-base
@@ -1553,7 +1522,6 @@ This packages provides R-spatial, one of the recommended packages.
%files -n R-spatial
%defattr(-, root, root)
# spatial
%dir %{_libdir}/R/library/spatial/
%{_libdir}/R/library/spatial/CITATION
%{_libdir}/R/library/spatial/DESCRIPTION
@@ -1574,12 +1542,10 @@ This packages provides R-spatial, one of the recommended packages.
%{_libdir}/R/library/spatial/PP.files
%{_libdir}/R/library/spatial/R/
# survival
%package -n R-survival
Summary: Package provides recommended R-survival
Group: Development/Libraries/Other
Version: 2.40.1
Version: 2.41.3
Release: %release
Requires: R-base