Accepting request 1266562 from science

OBS-URL: https://build.opensuse.org/request/show/1266562
OBS-URL: https://build.opensuse.org/package/show/openSUSE:Factory/libhts?expand=0&rev=8

htslib-1.20.tar.bz2

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:e52d95b14da68e0cfd7d27faf56fef2f88c2eaf32a2be51c72e146e3aa928544
-size 4779028

htslib-1.21.tar.bz2

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:84b510e735f4963641f26fd88c8abdee81ff4cb62168310ae716636aac0f1823
+size 4781943

libhts.changes

@@ -1,3 +1,18 @@
+-------------------------------------------------------------------
+Fri Mar 28 10:44:21 UTC 2025 - Stefan Brüns <stefan.bruens@rwth-aachen.de>
+
+- Update to version 1.21:
+  * Extend annot-tsv with several new command line options.
+  * Allow annot-tsv -a to rename annotations.
+  * Extend annot-tsv --overlap to be able to specify the overlap
+    fraction separately for source and target.
+  * Added new APIs to facilitate low-level CRAM container
+    manipulations, used by the new samtools cat region
+    filtering code.
+  * Some speed improvements.
+  For a complete list of changes, see
+  https://github.com/samtools/htslib/releases/tag/1.21 
+
 -------------------------------------------------------------------
 Mon Jul 15 12:17:55 UTC 2024 - jun wang <jgwang@suse.com>
 

libhts.spec

@@ -1,7 +1,7 @@
 #
 # spec file for package libhts
 #
-# Copyright (c) 2024 SUSE LLC
+# Copyright (c) 2025 SUSE LLC
 #
 # All modifications and additions to the file contributed by third parties
 # remain the property of their copyright owners, unless otherwise agreed
@@ -17,10 +17,10 @@
 
 
 # Upstream does not bump htscodecs SOVERSION on backwards incompatible changes
-%define htscodecsminversion 1.6.0
+%define htscodecsminversion 1.6.1
 
 Name:           libhts
-Version:        1.20
+Version:        1.21
 Release:        0
 %define   sonum 3
 Summary:        C library for high-throughput sequencing data formats