Accepting request 1105322 from home:bnavigator:branches:devel:languages:python:numeric

- Update to 3.9.0
  * This version of h5py requires Python 3.8 or above.
  ## New features
  * New out argument to read_direct_chunk() to allow passing the
    output buffer (PR 2232).
  * The objects from Dataset.asstr() and Dataset.astype() now
    implement the __array__() method (PR 2269). This speeds up
    access for functions that support it, such as np.asarray().
  * Validate key types when creating groups and attributes, giving
    better error messages when invalid types are used (PR 2266).
  ## Deprecations & removals
  * Using Dataset.astype() as a context manager has been removed,
    after being deprecated in h5py 3.6. Read data by slicing the
    returned object instead: dset.astype('f4')[:].
  * Exposing HDF5 functions
  * H5Pget_elink_acc_flags & H5Pset_elink_acc_flags as
    h5py.h5p.PropLAID.get_elink_acc_flags() &
    h5py.h5p.PropLAID.set_elink_acc_flags(): access the external
    link file access traversal flags in a link access property list
    (PR 2244).
  * H5Zregister as h5py.h5z.register_filter(): register an HDF5
    filter (PR 2229).
  ## Bug fixes
  * Group.__contains__ and Group.get now use the default link
    access property list systematically (PR 2244).
  * Removed various calls to the deprecated numpy.product function
    (PR 2242 & PR 2273).
  * Fix the IPython tab-completion integration in IPython 8.12 (PR
    2256).
  * Replacing attributes with AttributeManager.create() now deletes

OBS-URL: https://build.opensuse.org/request/show/1105322
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-h5py?expand=0&rev=44

h5py-3.8.0.tar.gz

@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:6fead82f0c4000cf38d53f9c030780d81bfa0220218aee13b90b7701c937d95f
-size 400774

h5py-3.9.0.tar.gz

@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:e604db6521c1e367c6bd7fad239c847f53cc46646f2d2651372d05ae5e95f817
+size 402856

python-h5py.changes

@@ -1,3 +1,50 @@
+-------------------------------------------------------------------
+Tue Aug 22 18:22:43 UTC 2023 - Ben Greiner <code@bnavigator.de>
+
+- Update to 3.9.0
+  * This version of h5py requires Python 3.8 or above.
+  ## New features
+  * New out argument to read_direct_chunk() to allow passing the
+    output buffer (PR 2232).
+  * The objects from Dataset.asstr() and Dataset.astype() now
+    implement the __array__() method (PR 2269). This speeds up
+    access for functions that support it, such as np.asarray().
+  * Validate key types when creating groups and attributes, giving
+    better error messages when invalid types are used (PR 2266).
+  ## Deprecations & removals
+  * Using Dataset.astype() as a context manager has been removed,
+    after being deprecated in h5py 3.6. Read data by slicing the
+    returned object instead: dset.astype('f4')[:].
+  * Exposing HDF5 functions
+  * H5Pget_elink_acc_flags & H5Pset_elink_acc_flags as
+    h5py.h5p.PropLAID.get_elink_acc_flags() &
+    h5py.h5p.PropLAID.set_elink_acc_flags(): access the external
+    link file access traversal flags in a link access property list
+    (PR 2244).
+  * H5Zregister as h5py.h5z.register_filter(): register an HDF5
+    filter (PR 2229).
+  ## Bug fixes
+  * Group.__contains__ and Group.get now use the default link
+    access property list systematically (PR 2244).
+  * Removed various calls to the deprecated numpy.product function
+    (PR 2242 & PR 2273).
+  * Fix the IPython tab-completion integration in IPython 8.12 (PR
+    2256).
+  * Replacing attributes with AttributeManager.create() now deletes
+    the old attributes before creating the new one, rather than
+    using a temporary name and renaming the new attribute (PR
+    2274). This should avoid some confusing bugs affecting
+    attributes. However, failures creating an attribute are less
+    likely to leave an existing attribute of the same name in
+    place. To change an attribute value without changing its shape
+    or dtype, use modify() instead.
+  ## Building h5py
+  * When building with Parallel HDF5 support, the version of mpi4py
+    used on various Python versions is increased to 3.1.1, fixing
+    building with a newer setuptools (PR 2225).
+  * Some fixes towards compatibility with the upcoming Cython 3 (PR
+    2247).
+
 -------------------------------------------------------------------
 Thu Feb 16 10:05:30 UTC 2023 - Ben Greiner <code@bnavigator.de>
 

python-h5py.spec

@@ -60,16 +60,16 @@
 %endif
 # /SECTION MPI DEFINITIONS
 Name:           %{pname}%{?my_suffix}
-Version:        3.8.0
+Version:        3.9.0
 Release:        0
 Summary:        Python interface to the Hierarchical Data Format library
 License:        BSD-3-Clause
 Group:          Development/Libraries/Python
 URL:            https://github.com/h5py/h5py
 Source:         https://files.pythonhosted.org/packages/source/h/h5py/h5py-%{version}.tar.gz
-BuildRequires:  %{python_module Cython >= 0.29}
-BuildRequires:  %{python_module devel >= 3.7}
-BuildRequires:  %{python_module numpy-devel >= 1.14.5}
+BuildRequires:  %{python_module Cython >= 0.29 with %python-Cython < 1}
+BuildRequires:  %{python_module devel >= 3.8}
+BuildRequires:  %{python_module numpy-devel >= 1.17.3}
 BuildRequires:  %{python_module pip}
 BuildRequires:  %{python_module pkgconfig}
 BuildRequires:  %{python_module pytest}
@@ -80,12 +80,13 @@ BuildRequires:  hdf5%{?my_suffix}-devel
 BuildRequires:  python-rpm-macros
 %requires_eq    hdf5%{?my_suffix}
 %requires_eq    libhdf5%{?my_suffix}
-Requires:       python-numpy >= 1.14.5
+Requires:       python-numpy >= 1.17.3
 %if %{with mpi}
 BuildRequires:  %{mpi_flavor}%{mpi_vers}-devel
-BuildRequires:  %{python_module mpi4py >= 3.0.2}
+BuildRequires:  %{python_module mpi4py >= 3.1.1 if %python-base < 3.11}
+BuildRequires:  %{python_module mpi4py >= 3.1.4 if %python-base >= 3.11}
 BuildRequires:  %{python_module pytest-mpi}
-Requires:       python-mpi4py >= 3.0.2
+Requires:       python-mpi4py >= 3.1.1
 %endif
 %python_subpackages
 
@@ -119,7 +120,12 @@ export CFLAGS="%{optflags} -fno-strict-aliasing"
 %python_expand %fdupes %{buildroot}%{my_sitearch_in_expand}/h5py/
 
 %check
-%{python_expand # Offset test fails on 32-bit
+donttest="dummytest"
+%ifarch %{ix86} %{arm}
+# overflow
+donttest="test_float_round_tripping or test_register_filter"
+%endif
+%{python_expand #
 %if %{with mpi}
 source %{my_bindir}/mpivars.sh
 %endif
@@ -127,11 +133,7 @@ export LD_LIBRARY_PATH=%{my_libdir}
 export PYTHONPATH=%{buildroot}%{my_sitearch_in_expand}
 export PYTHONDONTWRITEBYTECODE=1
 pytest-%{$python_bin_suffix} %{buildroot}%{my_sitearch_in_expand}/h5py/ \
-%ifarch %{ix86}
-        %{?with_mpi:-k 'not test_float_round_tripping' -m 'not mpi_skip'}%{!?with_mpi:-k 'not (TestMPI or test_float_round_tripping)'}
-%else
-        %{?with_mpi:-m 'not mpi_skip'}%{!?with_mpi:-k 'not TestMPI'}
-%endif
+%{?with_mpi:-k "not ($donttest)" -m 'not mpi_skip'}%{!?with_mpi:-k "not (TestMPI or $donttest)"}
 }
 
 %files %{python_files}