Accepting request 1109356 from home:bnavigator:branches:devel:languages:python:numeric:pandas
- Use git cloned archive gh#pandas-dev/pandas#54907 - Update to 2.1.0 * https://pandas.pydata.org/pandas-docs/version/2.1.0/whatsnew/v2.1.0.html * Avoid NumPy object dtype for strings by default * DataFrame reductions preserve extension dtypes * Copy-on-Write improvements * New DataFrame.map() method and support for ExtensionArrays * New implementation of DataFrame.stack() * Other minor enhancements (see link above) ## Backwards incompatible API changes * pandas 2.1.0 supports Python 3.9 and higher * Increased minimum versions for numpy 1.22.3 and some optional dependencies * arrays.PandasArray has been renamed NumpyExtensionArray and the attached dtype name changed from PandasDtype to NumpyEADtype; importing PandasArray still works until the next major version (GH 53694) ## Deprecations * Deprecated silent upcasting in setitem-like Series operations * Deprecated parsing datetimes with mixed time zones * Other Deprecation (see link above) ## More * Performance Improvements (see link above) * Bug fixes (see linkl above) - Switch to meson build system OBS-URL: https://build.opensuse.org/request/show/1109356 OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-pandas?expand=0&rev=94
This commit is contained in:
Git OBS Bridge
parent
e08d685614
commit
078ed02459
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_service
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16
_service
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<services>
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<service name="tar_scm" mode="disabled">
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<param name="url">https://github.com/pandas-dev/pandas.git</param>
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<param name="scm">git</param>
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<param name="revision">v2.1.0</param>
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<param name="versionformat">@PARENT_TAG@</param>
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<param name="versionrewrite-pattern">v(.*)</param>
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<param name="filename">pandas</param>
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<param name="package-meta">yes</param>
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</service>
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<service name="recompress" mode="disabled">
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<param name="file">*.tar</param>
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<param name="compression">gz</param>
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</service>
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<service name="set_version" mode="disabled" />
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</services>
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@ -1,3 +0,0 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:e7ea4798650316b2c45cf801ff02e3d6e79614696c8f0731b24715aad9969516
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size 14041853
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3
pandas-2.1.0.tar.gz
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3
pandas-2.1.0.tar.gz
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@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:a455bda2cbdd94067a7b085ea70418c6ab017bbc517e8d8408415065831a28c3
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size 46646448
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@ -1,3 +1,36 @@
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-------------------------------------------------------------------
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Tue Sep 5 21:02:37 UTC 2023 - Ben Greiner <code@bnavigator.de>
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- Use git cloned archive gh#pandas-dev/pandas#54907
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-------------------------------------------------------------------
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Thu Aug 31 14:51:11 UTC 2023 - Ben Greiner <code@bnavigator.de>
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- Update to 2.1.0
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* https://pandas.pydata.org/pandas-docs/version/2.1.0/whatsnew/v2.1.0.html
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* Avoid NumPy object dtype for strings by default
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* DataFrame reductions preserve extension dtypes
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* Copy-on-Write improvements
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* New DataFrame.map() method and support for ExtensionArrays
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* New implementation of DataFrame.stack()
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* Other minor enhancements (see link above)
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## Backwards incompatible API changes
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* pandas 2.1.0 supports Python 3.9 and higher
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* Increased minimum versions for numpy 1.22.3 and some optional
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dependencies
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* arrays.PandasArray has been renamed NumpyExtensionArray and the
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attached dtype name changed from PandasDtype to NumpyEADtype;
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importing PandasArray still works until the next major version
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(GH 53694)
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## Deprecations
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* Deprecated silent upcasting in setitem-like Series operations
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* Deprecated parsing datetimes with mixed time zones
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* Other Deprecation (see link above)
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## More
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* Performance Improvements (see link above)
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* Bug fixes (see linkl above)
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- Switch to meson build system
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-------------------------------------------------------------------
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Sun Aug 13 21:50:37 UTC 2023 - Dirk Müller <dmueller@suse.com>
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@ -48,42 +48,38 @@
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%bcond_with gcp
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# xlsb not available
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%bcond_with xslb
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%bcond_with consortium_standard
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%{?sle15_python_module_pythons}
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Name: python-pandas%{psuffix}
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Version: 2.0.3
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# Set version through _service
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Version: 2.1.0
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Release: 0
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Summary: Python data structures for data analysis, time series, and statistics
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License: BSD-3-Clause
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Group: Development/Libraries/Python
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URL: https://pandas.pydata.org/
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# Use GitHub Archive: Test-data
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Source0: https://github.com/pandas-dev/pandas/archive/refs/tags/v%{version}.tar.gz#/pandas-%{version}-gh.tar.gz
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# SourceRepository: https://github.com/pandas-dev/pandas
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# Must be created by cloning through `osc service runall`: gh#pandas-dev/pandas#54903, gh#pandas-dev/pandas#54907
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Source0: pandas-%{version}.tar.gz
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BuildRequires: %{python_module Cython >= 0.29.33 with %python-Cython < 3}
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BuildRequires: %{python_module devel >= 3.8}
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BuildRequires: %{python_module numpy-devel >= 1.20.3}
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BuildRequires: %{python_module devel >= 3.9}
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BuildRequires: %{python_module meson-python >= 0.13.1}
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BuildRequires: %{python_module numpy-devel >= 1.22.4}
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BuildRequires: %{python_module pip}
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BuildRequires: %{python_module setuptools >= 61.0.0}
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BuildRequires: %{python_module versioneer-toml}
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BuildRequires: %{python_module wheel}
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BuildRequires: fdupes
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BuildRequires: gcc-c++
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BuildRequires: git-core
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BuildRequires: meson >= 1.0.1
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BuildRequires: python-rpm-macros
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Requires: python-python-dateutil >= 2.8.2
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Requires: python-pytz >= 2020.1
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Requires: timezone >= 2022a
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Obsoletes: python-pandas-doc < %{version}
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Provides: python-pandas-doc = %{version}
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%if 0%{?python_version_nodots} >= 311
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Requires: python-numpy >= 1.23.2
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%else
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%if 0%{?python_version_nodots} >= 310
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Requires: python-numpy >= 1.21.0
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%else
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Requires: python-numpy >= 1.20.3
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%endif
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%endif
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Requires: python-numpy >= 1.22.4
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# SECTION extras
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Recommends: python-pandas-performance
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Suggests: python-pandas-all
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@ -138,6 +134,7 @@ BuildRequires: %{python_module pandas-xml = %{version}}
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BuildRequires: xclip
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%{?_with_aws:BuildRequires: %{python_module pandas-aws = %{version}}}
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%{?_with_gcp:BuildRequires: %{python_module pandas-gcp = %{version}}}
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%{?_with_consortium_standard:BuildRequires: %{python_module pandas-consortium-standard = %{version}}}
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%endif
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%endif
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%python_subpackages
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@ -150,9 +147,9 @@ block for doing data analysis in Python.
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%package test
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Summary: The python pandas[test] extra
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Requires: python-hypothesis >= 6.34.2
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Requires: python-hypothesis >= 6.46.1
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Requires: python-pandas = %{version}
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Requires: python-pytest >= 7.0.0
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Requires: python-pytest >= 7.3.2
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Requires: python-pytest-asyncio >= 0.17.0
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Requires: python-pytest-xdist >= 2.2.0
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BuildArch: noarch
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@ -162,9 +159,9 @@ This package provides the [test] extra for python-pandas
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%package performance
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Summary: The python pandas[performance] extra
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Requires: python-Bottleneck >= 1.3.2
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Requires: python-numba >= 0.53.1
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Requires: python-numexpr >= 2.7.1
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Requires: python-Bottleneck >= 1.3.4
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Requires: python-numba >= 0.55.2
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Requires: python-numexpr >= 2.8.0
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -177,8 +174,8 @@ provide speed improvements, especially when working with large data sets.
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%package computation
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Summary: The python pandas[computation] extra
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Requires: python-pandas = %{version}
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Requires: python-scipy >= 1.7.1
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Requires: python-xarray >= 0.21.0
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Requires: python-scipy >= 1.8.1
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Requires: python-xarray >= 2022.03
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BuildArch: noarch
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%description computation
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@ -186,7 +183,7 @@ This package provides the [computation] extra for python-pandas
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%package fss
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Summary: The python pandas[fss] extra
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Requires: python-fsspec >= 2021.07.0
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Requires: python-fsspec >= 2022.05
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -196,7 +193,7 @@ This package provides the [fss] extra for python-pandas
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%package aws
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Summary: The python pandas[aws] extra
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Requires: python-pandas = %{version}
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Requires: python-s3fs >= 2021.08.0
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Requires: python-s3fs >= 2022.05.0
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BuildArch: noarch
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%description aws
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@ -204,9 +201,9 @@ This package provides the [aws] extra for python-pandas
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%package gcp
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Summary: The python pandas[gcp] extra
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Requires: python-gcsfs >= 2021.07.0
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Requires: python-gcsfs >= 2022.05.0
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||||
Requires: python-pandas = %{version}
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Requires: python-pandas-gbq >= 0.15.0
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Requires: python-pandas-gbq >= 0.17.5
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BuildArch: noarch
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%description gcp
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@ -215,10 +212,10 @@ This package provides the [gcp] extra for python-pandas
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%package excel
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Summary: The python pandas[excel] extra
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Requires: python-odfpy >= 1.4.1
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Requires: python-openpyxl >= 3.0.7
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Requires: python-openpyxl >= 3.0.10
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Requires: python-pandas = %{version}
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%{?_with_xlsb:Requires: python-pyxlsb >= 1.0.8}
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Requires: python-XlsxWriter >= 1.4.3
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%{?_with_xlsb:Requires: python-pyxlsb >= 1.0.9}
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Requires: python-XlsxWriter >= 3.0.3
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Requires: python-xlrd >= 2.0.1
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BuildArch: noarch
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@ -248,7 +245,7 @@ This package provides the [feather] extra for python-pandas
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Summary: The python pandas[hdf5] extra
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Requires: python-blosc
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Requires: python-pandas = %{version}
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Requires: python-tables >= 3.6.1
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Requires: python-tables >= 3.7.0
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BuildArch: noarch
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%description hdf5
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@ -257,7 +254,7 @@ This package provides the [hdf5] extra for python-pandas
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%package spss
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Summary: The python pandas[spss] extra
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Requires: python-pandas = %{version}
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Requires: python-pyreadstat >= 1.1.2
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Requires: python-pyreadstat >= 1.1.5
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BuildArch: noarch
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%description spss
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@ -265,9 +262,9 @@ This package provides the [spss] extra for python-pandas
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%package postgresql
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Summary: The python pandas[postgresql] extra
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Requires: python-SQLAlchemy >= 1.4.16
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Requires: python-SQLAlchemy >= 1.4.36
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Requires: python-pandas = %{version}
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Requires: python-psycopg2 >= 2.8.6
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Requires: python-psycopg2 >= 2.9.3
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BuildArch: noarch
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%description postgresql
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@ -276,7 +273,7 @@ This package provides the [postgresql] extra for python-pandas
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%package mysql
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Summary: The python pandas[mysql] extra
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Requires: python-PyMySQL >= 1.0.2
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Requires: python-SQLAlchemy >= 1.4.16
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Requires: python-SQLAlchemy >= 1.4.36
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -285,7 +282,7 @@ This package provides the [mysql] extra for python-pandas
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%package sql-other
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Summary: The python pandas[sql-other] extra
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Requires: python-SQLAlchemy >= 1.4.16
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Requires: python-SQLAlchemy >= 1.4.36
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -294,9 +291,9 @@ This package provides the [sql-other] extra for python-pandas
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%package html
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Summary: The python pandas[html] extra
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Requires: python-beautifulsoup4 >= 4.9.3
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Requires: python-beautifulsoup4 >= 4.11.1
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Requires: python-html5lib >= 1.1
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Requires: python-lxml >= 4.6.3
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Requires: python-lxml >= 4.8.0
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -305,7 +302,7 @@ This package provides the [html] extra for python-pandas
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%package xml
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Summary: The python pandas[xml] extra
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Requires: python-lxml >= 4.6.3
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Requires: python-lxml >= 4.8.0
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -323,9 +320,9 @@ This package provides the [plot] extra for python-pandas
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%package output_formatting
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Summary: The python pandas[output_formatting] extra
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Requires: python-Jinja2 >= 3.0.0
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Requires: python-Jinja2 >= 3.1.2
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Requires: python-pandas = %{version}
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Requires: python-tabulate >= 0.8.9
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Requires: python-tabulate >= 0.8.10
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BuildArch: noarch
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%description output_formatting
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@ -333,7 +330,7 @@ This package provides the [output_formatting] extra for python-pandas
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%package clipboard
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Summary: The python pandas[clipboard] extra
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Requires: python-PyQt5 >= 5.15.1
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Requires: python-PyQt5 >= 5.15.6
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Requires: python-QtPy >= 2.2.0
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Requires: python-pandas = %{version}
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BuildArch: noarch
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@ -343,55 +340,61 @@ This package provides the [clipboard] extra for python-pandas
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%package compression
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Summary: The python pandas[compression] extra
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Requires: python-brotlipy >= 0.7.0
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Requires: python-pandas = %{version}
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Requires: python-python-snappy >= 0.6.0
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Requires: python-zstandard >= 0.15.2
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Requires: python-zstandard >= 0.17.0
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BuildArch: noarch
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%description compression
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This package provides the [compression] extra for python-pandas
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%package consortium-standard
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Summary: The python pandas[consortium-standard] extra
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Requires: python-dataframe-api-compat >= 0.1.7
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Requires: python-pandas = %{version}
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BuildArch: noarch
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%description consortium-standard
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This package provides the [consortium-standard] extra for python-pandas
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%package all
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Summary: The python pandas[all] extra
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Requires: python-Bottleneck >= 1.3.2
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Requires: python-Jinja2 >= 3.0.0
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Requires: python-Bottleneck >= 1.3.4
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Requires: python-Jinja2 >= 3.1.2
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Requires: python-PyMySQL >= 1.0.2
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Requires: python-PyQt5 >= 5.15.1
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Requires: python-PyQt5 >= 5.15.6
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Requires: python-QtPy >= 2.2.0
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Requires: python-SQLAlchemy >= 1.4.16
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Requires: python-XlsxWriter >= 1.4.3
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Requires: python-SQLAlchemy >= 1.4.36
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Requires: python-XlsxWriter >= 3.0.3
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Requires: python-beautifulsoup4 >= 4.9.3
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Requires: python-blosc
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Requires: python-brotlipy >= 0.7.0
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Requires: python-fastparquet >= 0.6.3
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Requires: python-fsspec >= 2021.07.0
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Requires: python-gcsfs >= 2021.07.0
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Requires: python-fastparquet >= 0.8
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Requires: python-fsspec >= 2022.05
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Requires: python-gcsfs >= 2022.05
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Requires: python-html5lib >= 1.1
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Requires: python-hypothesis >= 6.34.2
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Requires: python-lxml >= 4.6.3
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Requires: python-hypothesis >= 6.46.1
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Requires: python-lxml >= 4.8.0
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Requires: python-matplotlib >= 3.6.1
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Requires: python-numba >= 0.53.1
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Requires: python-numexpr >= 2.7.3
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Requires: python-numba >= 0.55.2
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Requires: python-numexpr >= 2.8.0
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Requires: python-odfpy >= 1.4.1
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Requires: python-openpyxl >= 3.0.7
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Requires: python-openpyxl >= 3.0.10
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Requires: python-pandas = %{version}
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Requires: python-psycopg2 >= 2.8.6
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Requires: python-psycopg2 >= 2.9.3
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Requires: python-pyarrow >= 7.0.0
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Requires: python-pyreadstat >= 1.1.2
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Requires: python-pytest >= 7.0.0
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Requires: python-pyreadstat >= 1.1.5
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Requires: python-pytest >= 7.3.2
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Requires: python-pytest-asyncio >= 0.17.0
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Requires: python-pytest-xdist >= 2.2.0
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Requires: python-python-snappy >= 0.6.0
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Requires: python-scipy >= 1.7.1
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Requires: python-tables >= 3.6.1
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||||
Requires: python-tabulate >= 0.8.9
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||||
Requires: python-xarray >= 0.21.0
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||||
Requires: python-scipy >= 1.8.1
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||||
Requires: python-tables >= 3.7.0
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Requires: python-tabulate >= 0.8.10
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Requires: python-xarray >= 2022.03
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Requires: python-xlrd >= 2.0.1
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Requires: python-zstandard >= 0.15.2
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%{?_with_aws:Requires: python-s3fs >= 2021.08.0}
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%{?_with_gcp:Requires: python-pandas-gbq >= 0.15.0}
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||||
%{?_with_xslb:Requires: python-pyxlsb >= 1.0.8}
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||||
Requires: python-zstandard >= 0.17.0
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%{?_with_aws:Requires: python-s3fs >= 2022.05.0}
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%{?_with_gcp:Requires: python-pandas-gbq >= 0.17.5}
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%{?_with_xslb:Requires: python-pyxlsb >= 1.0.9}
|
||||
%{?_with_consortium_standard: Requires: python-dataframe-api-compat >= 0.1.7}
|
||||
BuildArch: noarch
|
||||
|
||||
%description all
|
||||
@ -403,15 +406,21 @@ because they are not available as openSUSE RPM packages:
|
||||
* pandas-gbq
|
||||
* pyxlsb
|
||||
* s3fs
|
||||
* dataframe-api-compat
|
||||
|
||||
You can install them directly through `pip3 install --user`, if needed.
|
||||
|
||||
%prep
|
||||
%autosetup -p1 -n pandas-%{version}
|
||||
# don't call pytest with --strict-data-files
|
||||
sed -i '/addopts/ {s/--strict-data-files//}' pyproject.toml
|
||||
# ATTENTION: unpack and generate _version_meson.py before any patches and modifications for a clean version
|
||||
%setup -q -n pandas-%{version}
|
||||
%if !%{with test}
|
||||
# any installed python3 will do (SLE15 python module pythons does note guarantee /usr/bin/python3)
|
||||
firstpython3=$(find %{_bindir} -name 'python3*' -print -quit)
|
||||
${firstpython3} generate_version.py -o _version_meson.py
|
||||
sed -i "s|'python', 'generate_version.py',|'${firstpython3}', 'generate_version.py',|" meson.build
|
||||
# don't require the PyPI data only tzdata package, we use the timezone RPM package
|
||||
sed -i '/dependencies = \[/,/\]/ {/tzdata.*>=/d}' pyproject.toml
|
||||
%endif
|
||||
|
||||
%build
|
||||
%if !%{with test}
|
||||
@ -422,7 +431,9 @@ export CFLAGS="%{optflags} -fno-strict-aliasing"
|
||||
%install
|
||||
%if !%{with test}
|
||||
%pyproject_install
|
||||
%{python_expand sed -i -e 's|"python", "-c",|"%{__$python}", "-c",|' %{buildroot}%{$python_sitearch}/pandas/tests/io/test_compression.py
|
||||
%{python_expand #
|
||||
find %{buildroot}%{$python_sitearch}/pandas/_libs -name '*.[ch]' -delete
|
||||
sed -i -e '/.[ch],/d' %{buildroot}%{$python_sitearch}/pandas-%{version}.dist-info/RECORD
|
||||
%fdupes %{buildroot}%{$python_sitearch}
|
||||
}
|
||||
%else
|
||||
@ -442,16 +453,18 @@ export PYTHONDONTWRITEBYTECODE=1
|
||||
# https://github.com/pytest-dev/pytest/issues/920
|
||||
# https://github.com/pytest-dev/pytest/issues/1075
|
||||
export PYTHONHASHSEED=1
|
||||
# --skip-* arguments: Upstream's custom way to skip marked tests. These do not use pytest.mark.
|
||||
SKIP_ARGS="--skip-network"
|
||||
# no network connection on obs
|
||||
SKIP_MARKERS="network"
|
||||
# clipboard not set up properly in build service without window manager
|
||||
SKIP_MARKERS="clipboard"
|
||||
SKIP_MARKERS+=" or clipboard"
|
||||
# skip tests which upstream marked for -n 1 only.
|
||||
SKIP_MARKERS+=" or single_cpu"
|
||||
# pytest-xdist worker crash
|
||||
SKIP_TESTS="test_pivot_number_of_levels_larger_than_int32"
|
||||
# no locally running database server
|
||||
SKIP_TESTS+=" or psycopg2_engine or psycopg2_conn or pymysql_engine or pymysql_conn"
|
||||
# expects a dirty git revision from git repo
|
||||
SKIP_TESTS+=" or test_git_version"
|
||||
|
||||
%ifarch %{ix86} %{arm32}
|
||||
# https://github.com/pandas-dev/pandas/issues/31856
|
||||
@ -462,6 +475,7 @@ SKIP_TESTS+=" or (test_rolling_quantile_interpolation_options and data1 and line
|
||||
SKIP_TESTS+=" or test_large_string_pyarrow"
|
||||
# dtype mismatch
|
||||
SKIP_TESTS+=" or test_frame_setitem_dask_array_into_new_col"
|
||||
SKIP_TESTS+=" or test_get_indexer_arrow_dictionary_target"
|
||||
# numba formats not supported on 32-bit
|
||||
SKIP_TESTS+=" or numba"
|
||||
%endif
|
||||
@ -491,7 +505,7 @@ SKIP_TESTS+=" or (test_groupby and test_groupby_numerical_stability_sum_mean)"
|
||||
SKIP_TESTS+=" or (test_groupby and test_groupby_numerical_stability_cumsum)"
|
||||
SKIP_TESTS+=" or (test_c_parser_only and test_float_precision_options)"
|
||||
# run the slow tests only on x86_64
|
||||
SKIP_ARGS+=" --skip-slow --skip-db"
|
||||
SKIP_MARKERS+=" or slow or db"
|
||||
%endif
|
||||
|
||||
# The test collection consumes a lot of memory per worker. This sets %%jobs.
|
||||
@ -501,7 +515,6 @@ SKIP_ARGS+=" --skip-slow --skip-db"
|
||||
# cache: can't just say no cacheprovider, because one test checks for the --lf option of pytest-cache
|
||||
xvfb-run pytest-%{$python_bin_suffix} -v -n %{jobs} -rsfE --dist=loadfile \
|
||||
-o cache_dir=$PWD/.pytest_cache --cache-clear \
|
||||
${SKIP_ARGS} \
|
||||
-m "not (${SKIP_MARKERS})" \
|
||||
-k "not (${SKIP_TESTS})" \
|
||||
pandas
|
||||
@ -511,7 +524,7 @@ xvfb-run pytest-%{$python_bin_suffix} -v -n %{jobs} -rsfE --dist=loadfile \
|
||||
%if !%{with test}
|
||||
%files %{python_files}
|
||||
%license LICENSE
|
||||
%doc README.md RELEASE.md
|
||||
%doc README.md
|
||||
%{python_sitearch}/pandas/
|
||||
%{python_sitearch}/pandas-%{version}.dist-info
|
||||
|
||||
@ -600,6 +613,12 @@ xvfb-run pytest-%{$python_bin_suffix} -v -n %{jobs} -rsfE --dist=loadfile \
|
||||
%license LICENSE
|
||||
%doc README.md
|
||||
|
||||
%if %{with consortium_standard}
|
||||
%files %{python_files consortium-standard}
|
||||
%license LICENSE
|
||||
%doc README.md
|
||||
%endif
|
||||
|
||||
%files %{python_files all}
|
||||
%license LICENSE
|
||||
%doc README.md
|
||||
|
||||
Loading…
Reference in New Issue
Block a user