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- Add patch support-gast-0.6.patch:

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* Support gast 0.6.0 changes, change Requires appropriately.

OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-pythran?expand=0&rev=48
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Steve Kowalik 2024-07-31 04:35:31 +00:00 committed by Git OBS Bridge
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## Default LFS
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.osc

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<multibuild>
<package>test-py310</package>
<package>test-py311</package>
<package>test-py312</package>
</multibuild>

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# SECTION This is a package that compiles code, the runtime requires devel packages
addFilter('devel-file-in-non-devel-package .*/site-packages/pythran/.*')
addFilter('devel-dependency .*')
addFilter('python-leftover-require python.*-numpy-devel')
# these are "default" headers for packages
addFilter('hidden-file-or-dir .*/\.hpp')

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-------------------------------------------------------------------
Wed Jul 31 04:32:03 UTC 2024 - Steve Kowalik <steven.kowalik@suse.com>
- Add patch support-gast-0.6.patch:
* Support gast 0.6.0 changes, change Requires appropriately.
-------------------------------------------------------------------
Sun Jun 30 20:49:58 UTC 2024 - Dirk Müller <dmueller@suse.com>
- limit to gast < 0.6.0
-------------------------------------------------------------------
Thu Jun 6 20:22:44 UTC 2024 - Dirk Müller <dmueller@suse.com>
- update to 0.16.1:
* Fix massive memory leakage in all ndarray
-------------------------------------------------------------------
Sat May 25 10:35:26 UTC 2024 - Ben Greiner <code@bnavigator.de>
- Update to 0.16.0
* Support numpy.vectorize, numpy.argsort's kind keyword,
real/imag on numpy_iexpr
* Add missing omp.set_num_thread descriptor
* Provide --trace-allocations switch
* Support empty PYTHRANRC for reproducible builds
* Improve compilation time
* Support ufunc creation through #pythran export ufunc
func_name(arg_types...)
* Fix memory leak when returing numpy_gexpr to Python
* Numpy 2.x support
* Upgrade xsimd to 13.0.0
* Improve detection of non-overlapping memory area during gexpr
assignment
* Improve python 3.12 support (distutils removal)
* Support imatmul
* Only link blas when needed
-------------------------------------------------------------------
Thu Apr 25 09:21:21 UTC 2024 - Ben Greiner <code@bnavigator.de>
- Refactor the multibuild test flavor logic
- Accomodate some 15.x intricacies for the failing tests:
* use netlib lapack/blas instead of openblas
-------------------------------------------------------------------
Fri Feb 23 12:24:06 UTC 2024 - Dominique Leuenberger <dimstar@opensuse.org>
- Use newly supported shrink{} on OBS to exclude python flavors
will all python versions skipped.
-------------------------------------------------------------------
Sat Feb 17 19:56:24 UTC 2024 - Ben Greiner <code@bnavigator.de>
- Yet another fix of the python39 test skip
-------------------------------------------------------------------
Wed Feb 7 13:53:21 UTC 2024 - Ben Greiner <code@bnavigator.de>
- Fix python312 tests: Force linking to openblas with custom
pythranrc
- Remove test skips no longer needed
- Make test flavors future proof: Don't fail on empty buildset
- Skip python39 for all test flavors: The test-py39 multibuild has
already been removed but it is still in the build set, so don't
test it in the other multibuilds.
- Debundle xsimd
-------------------------------------------------------------------
Tue Feb 6 11:05:29 UTC 2024 - Dirk Müller <dmueller@suse.com>
- update to 0.15.0:
* Use pyproject.toml to store setup and build configuration
* Upgrade xsimd to a48ab430d4b84ecd5449180ee1c6d2eed67c4191
* Improve detection of non-overlapping memory area during gexpr
assignment
* Support python 3.12
* Support list.clear
* Improve detection of methods uses as functions
-------------------------------------------------------------------
Tue Feb 6 09:05:01 UTC 2024 - Dirk Müller <dmueller@suse.com>
- drop python39 from testing, add python312
-------------------------------------------------------------------
Wed Nov 29 04:27:01 UTC 2023 - Steve Kowalik <steven.kowalik@suse.com>
- Prepare for Python 3.12, by skipping it for the other test flavors, and
adding one for it.
-------------------------------------------------------------------
Tue Nov 21 06:35:39 UTC 2023 - Steve Kowalik <steven.kowalik@suse.com>
- Update to 0.14.0:
* Numpy compatibility - update signatures, complex number handling, long
double support
* Lazyly import top-level modules and submodules
* Improve array indexing by an array
* Require at least clang 7 or gcc 8
* Make pythran compilation reproducible
* Support np.roll with multiple axis
* Support numpy.ndarray.view
* Improve list resizing speed
* Fix bug when filtering an empty sequence
- Drop patches, now included upstream:
* numpy-longdouble.patch
* numpy-complex.patch
- Switch to pyproject macros.
-------------------------------------------------------------------
Tue Aug 8 16:00:58 UTC 2023 - ecsos <ecsos@opensuse.org>
- Fix build error in Leap, because it must not be two "Patch:" lines.
-------------------------------------------------------------------
Thu Jul 27 10:10:55 UTC 2023 - Markéta Machová <mmachova@suse.com>
- Add upstream numpy-longdouble.patch and numpy-complex.patch to support new numpy
-------------------------------------------------------------------
Sat Jun 10 17:53:22 UTC 2023 - ecsos <ecsos@opensuse.org>
- Add %{?sle15_python_module_pythons}
-------------------------------------------------------------------
Mon May 15 15:19:41 UTC 2023 - Dirk Müller <dmueller@suse.com>
- update to 0.13.1:
* Bump xsimd dependency to 11.0.0, with a backported patch.
* Improve performance of functions revieving scalar arguments.
This changes the internal function call API.
* Improve performance of fix-stride slicing, using a new slice
representation.
* Improve numpy.copyto performance, and detect copyto pattern usage.
* Force internal linkage of generated functions, which gives more
optimization room to the C++ compiler.
* Provide entry points pythran.import_pythrancode and
pythran.import_pythranfile, as a poor man JIT option.
* Optimize numpy.argmax(cst * val) into numpy.argmax(val) when cst is
positive.
* Avoid copies upon numpy.array_split
* Get rid of unused functions C++ warnings
* Avoid generating a loop footer when the loop index is not used
outside of the loop.
- fix the test-flavor splitting for python311
-------------------------------------------------------------------
Wed Jan 25 10:22:53 UTC 2023 - Dirk Müller <dmueller@suse.com>
- update to 0.12.1:
* Bump xsimd depdency to 10.0.0
* Correctly raise KeyError when getting an unset dict item
* Fix negative binomial implementation
* Correctly convert strided array with offset
* Support np.clip(v, None, x) and np.clip(v, x, None)
* Support scipy.special.ndtr, scipy.special.ndtri, scipy.special.gammaincinv
* Fix set intersection
* Support numpy.fft.fftn
* Support axis parameter in numpy.argsort
-------------------------------------------------------------------
Sun Dec 25 11:01:09 UTC 2022 - Ben Greiner <code@bnavigator.de>
- Revert. 2046-fix-cli-doc-test.patch did not fix the tests.
gh#serge-sans-paille/pythran#2046
-------------------------------------------------------------------
Sat Dec 17 14:32:56 UTC 2022 - Matej Cepl <mcepl@suse.com>
- Add 2046-fix-cli-doc-test.patch to fix failing tests
(gh#serge-sans-paille/pythran#2046).
-------------------------------------------------------------------
Fri Nov 25 01:54:50 UTC 2022 - Matej Cepl <mcepl@suse.com>
- Skip also failing test_toolchain and test_cli
(gh#serge-sans-paille/pythran#2044) tests.
-------------------------------------------------------------------
Tue Oct 11 08:41:50 UTC 2022 - Ben Greiner <code@bnavigator.de>
- Update to 0.12.0
* Improve numpy expression computation speed
* Decent ICC support (fixing an issue from 2018!)
* Much faster C++ code generation
* Complete rework of constant folder
* Support C++-time evaluation of numpy.ndarray.ndim
* Improved omp declare reduction support
* Allow indexing of ndarray by integers of mixed types
* A lot of small pesty bug fixes in the C++ headers
- Drop patches
* gcc12-fixes.patch
* pythran-pr1984-fixdistutils.patch
-------------------------------------------------------------------
Mon Jul 18 12:24:47 UTC 2022 - Ben Greiner <code@bnavigator.de>
- Add pythran-pr1984-fixdistutils.patch
* gh#serge-sans-paille/pythran#1984
* Fixes gh#serge-sans-paille/pythran#1984 with setuptools >= 60
-------------------------------------------------------------------
Tue Mar 15 07:59:46 UTC 2022 - Martin Liška <mliska@suse.cz>
- Add gcc12-fixes.patch in order to fix GCC 12 building issues.
-------------------------------------------------------------------
Fri Jan 28 18:47:52 UTC 2022 - Ben Greiner <code@bnavigator.de>
- Fix errors uncovered by staging:
* Mention python-pythran-rpmlintrc
* also make :test-py* noarch so that no debuginfo package fails
-------------------------------------------------------------------
Sun Jan 23 15:10:57 UTC 2022 - Ben Greiner <code@bnavigator.de>
- Initial specfile for 0.11
* debundling inspired by Fedora package:
https://src.fedoraproject.org/rpms/pythran/blob/rawhide/f/pythran.spec
- Required by scipy 1.7

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#
# spec file for package python-pythran
#
# Copyright (c) 2024 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
# upon. The license for this file, and modifications and additions to the
# file, is the same license as for the pristine package itself (unless the
# license for the pristine package is not an Open Source License, in which
# case the license is the MIT License). An "Open Source License" is a
# license that conforms to the Open Source Definition (Version 1.9)
# published by the Open Source Initiative.
# Please submit bugfixes or comments via https://bugs.opensuse.org/
#
%global flavor @BUILD_FLAVOR@%{nil}
%{?sle15_python_module_pythons}
%if "%{flavor}" == ""
%define psuffix %{nil}
%bcond_with test
%else
%define psuffix -%{flavor}
%bcond_without test
%if "%{flavor}" != "test-py310"
%define skip_python310 1
%endif
%if "%{flavor}" != "test-py311"
%define skip_python311 1
%endif
%if "%{flavor}" != "test-py312"
%define skip_python312 1
%endif
# Skip empty buildsets, last one is for sle15_python_module_pythons
%if "%{shrink:%{pythons}}" == "" || ("%pythons" == "python311" && 0%{?skip_python311})
ExclusiveArch: donotbuild
%define python_module() %flavor-not-enabled-in-buildset-for-suse-%{?suse_version}
%else
ExclusiveArch: x86_64
%endif
%endif
Name: python-pythran%{psuffix}
Version: 0.16.1
Release: 0
Summary: Ahead of Time compiler for numeric kernels
License: BSD-3-Clause
URL: https://github.com/serge-sans-paille/pythran
# Tests are only availble from the github archive
Source0: https://github.com/serge-sans-paille/pythran/archive/refs/tags/%{version}.tar.gz#/pythran-%{version}-gh.tar.gz
Source99: python-pythran-rpmlintrc
# PATCH-FIX-UPSTREAM gh#serge-sans-paille/pythran#840a0e706ec39963aec6bcd1f118bf33177c20b4
Patch0: support-gast-0.6.patch
BuildRequires: %{python_module pip}
BuildRequires: %{python_module setuptools}
BuildRequires: %{python_module wheel}
BuildRequires: fdupes
BuildRequires: python-rpm-macros
Requires: python-beniget >= 0.4.0
Requires: python-numpy
Requires: python-ply >= 3.4
Requires: python-setuptools
Requires: (python-gast >= 0.6.0 with python-gast < 0.7.0)
Requires(post): update-alternatives
Requires(postun): update-alternatives
# SECTION This is a package that compiles code, the runtime requires devel packages
Requires: boost-devel
Requires: gcc-c++
Requires: python-devel
Requires: python-numpy-devel
Requires: xsimd-devel >= 13.0.0
# /SECTION
%if %{with test}
BuildRequires: %{python_module ipython}
BuildRequires: %{python_module packaging}
BuildRequires: %{python_module pip}
BuildRequires: %{python_module pytest-xdist}
BuildRequires: %{python_module pytest}
BuildRequires: %{python_module pythran = %{version}}
BuildRequires: %{python_module wheel}
%if 0%{?suse_version} > 1500
BuildRequires: openblas-devel
%else
BuildRequires: cblas-devel
BuildRequires: lapack-devel
%endif
BuildRequires: unzip
%endif
BuildArch: noarch
%python_subpackages
%description
Ahead of Time compiler for numeric kernels
%prep
%autosetup -p1 -n pythran-%{version}
find -name '*.hpp' -exec chmod -x {} +
sed -i '1{/env python/d}' pythran/run.py
# remove embedded VIM swap files
find -type f -name "*.swp" -delete
# Remove bundled header libs and use the ones from system
rm -r pythran/boost pythran/xsimd
%build
%if !%{with test}
%pyproject_wheel
%endif
%install
%if !%{with test}
%pyproject_install
%python_clone -a %{buildroot}%{_bindir}/pythran
%python_clone -a %{buildroot}%{_bindir}/pythran-config
%python_expand %fdupes %{buildroot}%{$python_sitelib}
%endif
%if %{with test}
%check
export CFLAGS="%{optflags}"
%if 0%{?suse_version} > 1500
# Force to link against openblas during tests because the update-alternatives setup
# for lapack/cblas/openblas might be inconsistent inside obs builds
cat > config.pythranrc <<EOF
[compiler]
blas=openblas
libs=openblas
EOF
export PYTHRANRC=$PWD/config.pythranrc
%endif
# pytest_extra_args is for debug builds with local defines on command line
%pytest %{?jobs:-n %jobs} %{?pytest_extra_args}
%endif
%if !%{with test}
%post
%python_install_alternative pythran pythran-config
%postun
%python_uninstall_alternative pythran
%files %{python_files}
%doc AUTHORS Changelog README.rst
%license LICENSE
%python_alternative %{_bindir}/pythran
%python_alternative %{_bindir}/pythran-config
%{python_sitelib}/pythran
%{python_sitelib}/omp
%{python_sitelib}/pythran-%{version}.dist-info
%endif
%changelog

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version https://git-lfs.github.com/spec/v1
oid sha256:a2510f370a7d62761844daa112a455785e5a6a216cf9ae704c3926fe68eb65ce
size 3680817

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From 840a0e706ec39963aec6bcd1f118bf33177c20b4 Mon Sep 17 00:00:00 2001
From: serge-sans-paille <serge.guelton@telecom-bretagne.eu>
Date: Sat, 29 Jun 2024 19:13:02 +0200
Subject: [PATCH] Bump gast requirement to 0.6.0
This mostly helps for harmonious behavior wrt. gast.dump
---
docs/TUTORIAL.rst | 8 ++++----
pythran/utils.py | 2 +-
requirements.txt | 2 +-
3 files changed, 6 insertions(+), 6 deletions(-)
diff --git a/docs/TUTORIAL.rst b/docs/TUTORIAL.rst
index 09f6902f9..7692547eb 100644
--- a/docs/TUTORIAL.rst
+++ b/docs/TUTORIAL.rst
@@ -20,7 +20,7 @@ Python ships a standard module, ``ast`` to turn Python code into an AST. For ins
>>> code = "a=1"
>>> tree = ast.parse(code) # turn the code into an AST
>>> print(ast.dump(tree)) # view it as a string
- Module(body=[Assign(targets=[Name(id='a', ctx=Store(), annotation=None, type_comment=None)], value=Constant(value=1, kind=None), type_comment=None)], type_ignores=[])
+ Module(body=[Assign(targets=[Name(id='a', ctx=Store())], value=Constant(value=1, kind=None))])
Deciphering the above line, one learns that the single assignment is parsed as
a module containing a single statement, which is an assignment to a single
@@ -33,7 +33,7 @@ Eventually, one needs to parse more complex codes, and things get a bit more cry
... return n if n< 2 else fib(n-1) + fib(n-2)"""
>>> tree = ast.parse(fib_src)
>>> print(ast.dump(tree))
- Module(body=[FunctionDef(name='fib', args=arguments(args=[Name(id='n', ctx=Param(), annotation=None, type_comment=None)], posonlyargs=[], vararg=None, kwonlyargs=[], kw_defaults=[], kwarg=None, defaults=[]), body=[Return(value=IfExp(test=Compare(left=Name(id='n', ctx=Load(), annotation=None, type_comment=None), ops=[Lt()], comparators=[Constant(value=2, kind=None)]), body=Name(id='n', ctx=Load(), annotation=None, type_comment=None), orelse=BinOp(left=Call(func=Name(id='fib', ctx=Load(), annotation=None, type_comment=None), args=[BinOp(left=Name(id='n', ctx=Load(), annotation=None, type_comment=None), op=Sub(), right=Constant(value=1, kind=None))], keywords=[]), op=Add(), right=Call(func=Name(id='fib', ctx=Load(), annotation=None, type_comment=None), args=[BinOp(left=Name(id='n', ctx=Load(), annotation=None, type_comment=None), op=Sub(), right=Constant(value=2, kind=None))], keywords=[]))))], decorator_list=[], returns=None, type_comment=None)], type_ignores=[])
+ Module(body=[FunctionDef(name='fib', args=arguments(args=[Name(id='n', ctx=Param())]), body=[Return(value=IfExp(test=Compare(left=Name(id='n', ctx=Load()), ops=[Lt()], comparators=[Constant(value=2, kind=None)]), body=Name(id='n', ctx=Load()), orelse=BinOp(left=Call(func=Name(id='fib', ctx=Load()), args=[BinOp(left=Name(id='n', ctx=Load()), op=Sub(), right=Constant(value=1, kind=None))]), op=Add(), right=Call(func=Name(id='fib', ctx=Load()), args=[BinOp(left=Name(id='n', ctx=Load()), op=Sub(), right=Constant(value=2, kind=None))]))))])])
The idea remains the same. The whole Python syntax is described in
http://docs.python.org/2/library/ast.html and is worth a glance, otherwise
@@ -199,7 +199,7 @@ constant expressions. In the previous code, there is only two constant
>>> ce = pm.gather(analyses.ConstantExpressions, tree)
>>> sorted(map(ast.dump, ce))
- ["Attribute(value=Name(id='math', ctx=Load(), annotation=None, type_comment=None), attr='cos', ctx=Load())", 'Constant(value=3, kind=None)']
+ ["Attribute(value=Name(id='math', ctx=Load()), attr='cos', ctx=Load())", 'Constant(value=3, kind=None)']
One of the most critical analyse of Pythran is the points-to analysis. There
are two flavors of this analyse, one that computes an over-set of the aliased
@@ -210,7 +210,7 @@ variable, and one that computes an under set. ``Aliases`` computes an over-set::
>>> al = pm.gather(analyses.Aliases, tree)
>>> returned = tree.body[-1].body[-1].value
>>> print(ast.dump(returned))
- Name(id='b', ctx=Load(), annotation=None, type_comment=None)
+ Name(id='b', ctx=Load())
>>> sorted(a.id for a in al[returned])
['c', 'd']
diff --git a/pythran/utils.py b/pythran/utils.py
index 2d7a67327..55a7e8ad6 100644
--- a/pythran/utils.py
+++ b/pythran/utils.py
@@ -106,7 +106,7 @@ def get_variable(assignable):
... slice=ast.Name('j', ast.Load(), None, None),
... ctx=ast.Load())
>>> ast.dump(get_variable(ref))
- "Name(id='a', ctx=Load(), annotation=None, type_comment=None)"
+ "Name(id='a', ctx=Load())"
"""
msg = "Only name and subscript can be assigned."
assert isinstance(assignable, (ast.Name, ast.Subscript)), msg
diff --git a/requirements.txt b/requirements.txt
index fd6a738e5..c7a25c52a 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -1,5 +1,5 @@
ply>=3.4
setuptools
-gast~=0.5.0
+gast~=0.6.0
numpy
beniget~=0.4.0