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Accepting request 819841 from home:bnavigator:branches:devel:languages:python:numeric

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- Switch from pytest macro back to astropy.test()
  This avoids compiling a second time inplace and obsoletes the
  necessary deprecation warningsfilters. New deprecation warnings
  from numpy 1.19 started to fail the test multibuild again.
  Can now drop astropy-openSUSE-ignore-warnings.patch
- Fix update-alternatives warnings by expanding the loop early 

fix multibuild setup

OBS-URL: https://build.opensuse.org/request/show/819841
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-astropy?expand=0&rev=30
This commit is contained in:
Tomáš Chvátal 2020-07-10 06:26:48 +00:00 committed by Git OBS Bridge
parent 488994a6b4
commit a2a197c8df
3 changed files with 20 additions and 51 deletions
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23
astropy-openSUSE-ignore-warnings.patch
View File

@ -1,23 +0,0 @@
From: Benjamin Greiner <code@bnavigator.de>
Date: 2020-07-05 13:43:14 +0200
Subject: ignore test warnings for reproducible builds
References: gh#astropy/astropy#10228
Upstream: discussed on github, but openSUSE specific
Ignore leap-second and dubious year warnings for reproducible builds.
Patching setup.cfg instead of -W option for python/pytest call
because regular expressions do not work for the latter.
--- astropy-4.0.1.post1.orig/setup.cfg 2020-04-02 03:18:04.000000000 +0200
+++ astropy-4.0.1.post1/setup.cfg 2020-07-05 13:43:14.132689750 +0200
@@ -120,6 +120,9 @@
ignore:PY_SSIZE_T_CLEAN will be required for '#' formats
ignore:::astropy.tests.plugins.display
ignore:::astropy.tests.disable_internet
+ ignore:the imp module is deprecated:DeprecationWarning
+ ignore:leap-second file is expired:astropy.utils.iers.iers.IERSStaleWarning
+ ignore:ERFA function.*dubious year:astropy.utils.exceptions.ErfaWarning
[bdist_wininst]
bitmap = static/wininst_background.bmp

10
python-astropy.changes
View File

@ -1,3 +1,13 @@
-------------------------------------------------------------------
Thu Jul 9 23:14:09 UTC 2020 - Benjamin Greiner <code@bnavigator.de>
- Switch from pytest macro back to astropy.test()
This avoids compiling a second time inplace and obsoletes the
necessary deprecation warningsfilters. New deprecation warnings
from numpy 1.19 started to fail the test multibuild again.
Can now drop astropy-openSUSE-ignore-warnings.patch
- Fix update-alternatives warnings by expanding the loop early
-------------------------------------------------------------------
Sun Jul 5 12:24:49 UTC 2020 - Benjamin Greiner <code@bnavigator.de>

38
python-astropy.spec
View File

@ -34,7 +34,6 @@ Summary: Community-developed python astronomy tools
License: BSD-3-Clause
URL: https://astropy.org
Source: https://files.pythonhosted.org/packages/source/a/astropy/astropy-%{version}.tar.gz
Patch0: astropy-openSUSE-ignore-warnings.patch
# Mark wcs headers as false positives for devel-file-in-non-devel-package
# These are used by the python files so they must be available.
Source100: python-astropy-rpmlintrc
@ -81,6 +80,7 @@ BuildRequires: %{python_module Bottleneck}
BuildRequires: %{python_module Jinja2}
BuildRequires: %{python_module PyYAML}
BuildRequires: %{python_module asdf >= 2.5}
BuildRequires: %{python_module astropy}
BuildRequires: %{python_module beautifulsoup4}
BuildRequires: %{python_module bleach}
BuildRequires: %{python_module h5py}
@ -108,9 +108,9 @@ common tools needed for performing astronomy and astrophysics research with
Python. It also provides an index for other astronomy packages and tools for
managing them.
%if !%{with test}
%prep
%setup -q -n astropy-%{version}
%patch0 -p1
# Make sure bundled libs are not used
rm -rf cextern/expat
@ -122,12 +122,9 @@ echo "[build]" >> setup.cfg
echo "use_system_libraries=1" >> setup.cfg
%build
%if !%{with test}
%python_build --use-system-libraries --offline
%endif
%install
%if !%{with test}
%python_install --use-system-libraries --offline
for b in %{binaries}; do
%python_clone -a %{buildroot}%{_bindir}/$b
@ -153,43 +150,28 @@ $python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/
}
%endif
%check
%if %{with test}
# http://docs.astropy.org/en/latest/development/testguide.html#running-tests
%python_exec setup.py build_ext --inplace --offline
# import from local source dir for proper conftest.py collection
# and using above inplace built extensions
export PYTHONPATH=$(pwd)
%check
%ifarch aarch64
# doctest failure because of precision errors
%define skippytest -k 'not bayesian_info_criterion_lsq'
%define skip_pytest -k 'not bayesian_info_criterion_lsq'
%endif
%pytest_arch --ignore 'docs/whatsnew' %{?skippytest}
# http://docs.astropy.org/en/latest/development/testguide.html#running-tests
# running pytest directly would require building the extensions inplace
%python_exec -B -c "import astropy; astropy.test(args=\"-v %{?skip_pytest}\")"
%endif
%if !%{with test}
%post
for b in %{binaries}; do
%python_install_alternative $b
done
%{expand:%(for b in %{binaries}; do echo "%%python_install_alternative $b"; done)}
%postun
for b in %{binaries}; do
%python_uninstall_alternative $b
done
%{expand:%(for b in %{binaries}; do echo "%%python_uninstall_alternative $b"; done)}
%files %{python_files}
%doc CHANGES.rst README.rst
%license licenses/*
%python_alternative %{_bindir}/fitsdiff
%python_alternative %{_bindir}/fitsheader
%python_alternative %{_bindir}/fitscheck
%python_alternative %{_bindir}/fitsinfo
%python_alternative %{_bindir}/fits2bitmap
%python_alternative %{_bindir}/samp_hub
%python_alternative %{_bindir}/showtable
%python_alternative %{_bindir}/volint
%python_alternative %{_bindir}/wcslint
%{expand:%(for b in %{binaries}; do echo "%%python_alternative %%{_bindir}/$b"; done)}
%{python_sitearch}/astropy/
%{python_sitearch}/astropy-%{version}-py*.egg-info
%endif