forked from pool/python-astropy
Accepting request 795557 from home:bnavigator:branches:devel:languages:python:numeric
- Update to 4.0.1.post1
* astropy.config
[gh#astropy/astropy#9975]
Fixed a bug where importing a development version of a package that
uses ``astropy`` configuration system can result in a
``~/.astropy/config/package..cfg`` file.
* astropy.coordinates
[gh#astropy/astropy#9815]
Fixed a bug where a vestigal trace of a frame class could persist in the
transformation graph even after the removal of all transformations involving
that frame class.
[gh#astropy/astropy#9815]
Fixed a bug with ``TransformGraph.remove_transform()`` when the "from" and
"to" frame classes are not explicitly specified.
[gh#astropy/astropy#9900]
Read-only longitudes can now be passed in to ``EarthLocation`` even if
they include angles outside of the range of -180 to 180 degrees.
[gh#astropy/astropy#9980]
```SkyCoord.radial_velocity_correction``` no longer raises an Exception
when space motion information is present on the SkyCoord.
* astropy.io
[gh#astropy/astropy#9866]
Fixed a bug that prevented the unified I/O infrastructure from working with
datasets that are represented by directories rather than files.
* astropy.io.ascii
[gh#astropy/astropy#9918]
Fixed a bug in the ``fast_reader`` C parsers incorrectly returning entries
of isolated positive/negative signs as ``float`` instead of ``str``.
[gh#astropy/astropy#9923]
Fixed a segmentation fault in the ``fast_reader`` C parsers when parsing an
invalid file with ``guess=True`` and the file contains inconsistent column
numbers in combination with a quoted field; e.g., ``"1 2\n 3 4 '5'"``.
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``ecsv`` files.
* astropy.io.misc
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
Fixed serialization of polynomial models to include non default values of
domain and window values.
[gh#astropy/astropy#9950]
Fixed a bug which affected overwriting tables within ``hdf5`` files.
Overwriting an existing path with associated column meta data now also
overwrites the meta data associated with the table.
[gh#astropy/astropy#9983]
Fixed serialization of Time objects with location under time-1.0.0
ASDF schema.
* astropy.io.fits
[gh#astropy/astropy#9711, gh#astropy/astropy#9934]
Fix regression with ``GroupsHDU`` which needs to modify the header to handle
invalid headers, and fix accesing ``.data`` for empty HDU.
[gh#astropy/astropy#9711]
Fix ``fitsdiff`` when its arguments are directories that contain other
directories.
[gh#astropy/astropy#9958]
Fix writing noncontiguous data to a compressed HDU.
[gh#astropy/astropy#9978]
Added verification of ``disp`` (``TDISP``) keyword to ``fits.Column`` and
extended tests for ``TFORM`` and ``TDISP`` validation.
[gh#astropy/astropy#10012]
Fix checksum verification to process all HDUs instead of only the first one
because of the lazy loading feature.
[gh#astropy/astropy#10030]
Allow passing ``output_verify`` to ``.close`` when using the context manager.
[gh#astropy/astropy#10041]
Prevent instantiation of ``PrimaryHDU`` and ``ImageHDU`` with a scalar.
[gh#astropy/astropy#10069]
Fix column access by attribute with FITS_rec: columns with scaling or columns
from ASCII tables where not properly converted when accessed by attribute
name.
* astropy.io.misc
[gh#astropy/astropy#9933]
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
Fixed serialization of polynomial models to include non default values of
domain and window values.
[gh#astropy/astropy#9950]
Fixed a bug which affected overwriting tables within ``hdf5`` files.
Overwriting an existing path with associated column meta data now also
overwrites the meta data associated with the table.
[gh#astropy/astropy#9983]
Fixed serialization of Time objects with location under time-1.0.0
ASDF schema.
* astropy.modeling
[gh#astropy/astropy#9987]
Fixed a bug in setting default values of parameters of orthonormal
polynomials when constructing a model set.
* astropy.table
[gh#astropy/astropy#9839]
Fixed bug in ``Table.reverse`` for tables that contain non-mutable mixin columns
(like ``SkyCoord``) for which in-place item update is not allowed.
[gh#astropy/astropy#9933]
Tables containing Magnitude, decibel, and dex columns can now be saved to
``ecsv`` files.
[gh#astropy/astropy#10027]
Fixed bug where adding or inserting a row fails on a table with an index
defined on a column that is not the first one.
[gh#astropy/astropy#10068]
Ensured that ``table.show_in_browser`` also worked for mixin columns like
``Time`` and ``SkyCoord``.
* astropy.time
[gh#astropy/astropy#9679]
Fix inaccuracy when converting between TimeDelta and datetime.timedelta.
[gh#astropy/astropy#9812]
Fixed exception when changing ``format`` in the case when ``out_subfmt`` is
defined and is incompatible with the new format.
[gh#astropy/astropy#9812]
Fixed exceptions in ``Time.to_value()``: when supplying any ``subfmt`` argument
for string-based formats like 'iso', and for ``subfmt='long'`` for the formats
'byear', 'jyear', and 'decimalyear'.
[gh#astropy/astropy#9969]
Fixed bug where the location attribute was lost when creating a new ``Time``
object from an existing ``Time`` or list of ``Time`` objects.
[gh#astropy/astropy#10034]
Fixed a bug where an exception occurred when creating a ``Time`` object
if the ``val1`` argument was a regular double and the ``val2`` argument
was a ``longdouble``.
* astropy.timeseries
[gh#astropy/astropy#10013]
Fixed issue with reference time for the ``transit_time`` parameter returned by
the ``BoxLeastSquares`` periodogram. Now, the ``transit_time`` will be within
the range of the input data and arbitrary time offsets/zero points no longer
affect results.
* astropy.units
[gh#astropy/astropy#9948]
Fix for ``quantity_input`` annotation raising an exception on iterable
types that don't define a general ``__contains__`` for checking if ``None``
is contained (e.g. Enum as of python3.8), by instead checking for instance of
Sequence.
[gh#astropy/astropy#10066]
Fix for ``u.Quantity`` not taking into account ``ndmin`` if constructed from
another ``u.Quantity`` instance with different but convertible unit
* astropy.utils
[gh#astropy/astropy#9981]
Fixed ``deprecated_renamed_argument`` not passing in user value to
deprecated keyword when the keyword has no new name.
[gh#astropy/astropy#9985]
Fixed ``deprecated_renamed_argument`` not issuing a deprecation warning when
deprecated keyword without new name is passed in as positional argument.
[gh#astropy/astropy#10007]
Fixed detection of read-only filesystems in the caching code.
* astropy.visualization
[gh#astropy/astropy#9848]
Fixed bug from matplotlib >=3.1 where an empty Quantity array is
sent for unit conversion as an empty list.
[gh#astropy/astropy#9913]
Fix bug in ``ZScaleInterval`` to return the array minimum and
maximum when there are less then ``min_npixels`` in the input array.
[gh#astropy/astropy#8004, gh#astropy/astropy#9991]
Fix a bug in simplifying axis labels that affected non-rectangular frames.
* Increase minimum asdf version to 2.5.2.
[gh#astropy/astropy#9996, gh#astropy/astropy#9819]
* Updated wcslib to v7.2. [gh#astropy/astropy#10021]
- updated test requirements and recommends
- run pytest directly
OBS-URL: https://build.opensuse.org/request/show/795557
OBS-URL: https://build.opensuse.org/package/show/devel:languages:python:numeric/python-astropy?expand=0&rev=23
This commit is contained in:
Todd R
Git OBS Bridge
parent
b0424dfedb
commit
d9b1c61d80
3
astropy-4.0.1.post1.tar.gz
Normal file
3
astropy-4.0.1.post1.tar.gz
Normal file
@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
|
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oid sha256:5c304a6c1845ca426e7bc319412b0363fccb4928cb4ba59298acd1918eec44b5
|
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size 8220187
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@ -1,3 +0,0 @@
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version https://git-lfs.github.com/spec/v1
|
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oid sha256:404200e0baa84de09ac563ad9ccab3817e9b9669d0025cee74a8752f4bc2771b
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size 8196953
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@ -1,3 +1,162 @@
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-------------------------------------------------------------------
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Sun Apr 19 10:53:30 UTC 2020 - Benjamin Greiner <code@bnavigator.de>
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- Update to 4.0.1.post1
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* astropy.config
|
||||
[gh#astropy/astropy#9975]
|
||||
Fixed a bug where importing a development version of a package that
|
||||
uses ``astropy`` configuration system can result in a
|
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``~/.astropy/config/package..cfg`` file.
|
||||
* astropy.coordinates
|
||||
[gh#astropy/astropy#9815]
|
||||
Fixed a bug where a vestigal trace of a frame class could persist in the
|
||||
transformation graph even after the removal of all transformations involving
|
||||
that frame class.
|
||||
[gh#astropy/astropy#9815]
|
||||
Fixed a bug with ``TransformGraph.remove_transform()`` when the "from" and
|
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"to" frame classes are not explicitly specified.
|
||||
[gh#astropy/astropy#9900]
|
||||
Read-only longitudes can now be passed in to ``EarthLocation`` even if
|
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they include angles outside of the range of -180 to 180 degrees.
|
||||
[gh#astropy/astropy#9980]
|
||||
```SkyCoord.radial_velocity_correction``` no longer raises an Exception
|
||||
when space motion information is present on the SkyCoord.
|
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* astropy.io
|
||||
[gh#astropy/astropy#9866]
|
||||
Fixed a bug that prevented the unified I/O infrastructure from working with
|
||||
datasets that are represented by directories rather than files.
|
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* astropy.io.ascii
|
||||
[gh#astropy/astropy#9918]
|
||||
Fixed a bug in the ``fast_reader`` C parsers incorrectly returning entries
|
||||
of isolated positive/negative signs as ``float`` instead of ``str``.
|
||||
[gh#astropy/astropy#9923]
|
||||
Fixed a segmentation fault in the ``fast_reader`` C parsers when parsing an
|
||||
invalid file with ``guess=True`` and the file contains inconsistent column
|
||||
numbers in combination with a quoted field; e.g., ``"1 2\n 3 4 '5'"``.
|
||||
[gh#astropy/astropy#9933]
|
||||
Magnitude, decibel, and dex can now be stored in ``ecsv`` files.
|
||||
* astropy.io.misc
|
||||
[gh#astropy/astropy#9933]
|
||||
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
|
||||
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
|
||||
Fixed serialization of polynomial models to include non default values of
|
||||
domain and window values.
|
||||
[gh#astropy/astropy#9950]
|
||||
Fixed a bug which affected overwriting tables within ``hdf5`` files.
|
||||
Overwriting an existing path with associated column meta data now also
|
||||
overwrites the meta data associated with the table.
|
||||
[gh#astropy/astropy#9983]
|
||||
Fixed serialization of Time objects with location under time-1.0.0
|
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ASDF schema.
|
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* astropy.io.fits
|
||||
[gh#astropy/astropy#9711, gh#astropy/astropy#9934]
|
||||
Fix regression with ``GroupsHDU`` which needs to modify the header to handle
|
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invalid headers, and fix accesing ``.data`` for empty HDU.
|
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[gh#astropy/astropy#9711]
|
||||
Fix ``fitsdiff`` when its arguments are directories that contain other
|
||||
directories.
|
||||
[gh#astropy/astropy#9958]
|
||||
Fix writing noncontiguous data to a compressed HDU.
|
||||
[gh#astropy/astropy#9978]
|
||||
Added verification of ``disp`` (``TDISP``) keyword to ``fits.Column`` and
|
||||
extended tests for ``TFORM`` and ``TDISP`` validation.
|
||||
[gh#astropy/astropy#10012]
|
||||
Fix checksum verification to process all HDUs instead of only the first one
|
||||
because of the lazy loading feature.
|
||||
[gh#astropy/astropy#10030]
|
||||
Allow passing ``output_verify`` to ``.close`` when using the context manager.
|
||||
[gh#astropy/astropy#10041]
|
||||
Prevent instantiation of ``PrimaryHDU`` and ``ImageHDU`` with a scalar.
|
||||
[gh#astropy/astropy#10069]
|
||||
Fix column access by attribute with FITS_rec: columns with scaling or columns
|
||||
from ASCII tables where not properly converted when accessed by attribute
|
||||
name.
|
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* astropy.io.misc
|
||||
[gh#astropy/astropy#9933]
|
||||
Magnitude, decibel, and dex can now be stored in ``hdf5`` files.
|
||||
[gh#astropy/astropy#9956, gh#astropy/astropy#9961]
|
||||
Fixed serialization of polynomial models to include non default values of
|
||||
domain and window values.
|
||||
[gh#astropy/astropy#9950]
|
||||
Fixed a bug which affected overwriting tables within ``hdf5`` files.
|
||||
Overwriting an existing path with associated column meta data now also
|
||||
overwrites the meta data associated with the table.
|
||||
[gh#astropy/astropy#9983]
|
||||
Fixed serialization of Time objects with location under time-1.0.0
|
||||
ASDF schema.
|
||||
* astropy.modeling
|
||||
[gh#astropy/astropy#9987]
|
||||
Fixed a bug in setting default values of parameters of orthonormal
|
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polynomials when constructing a model set.
|
||||
* astropy.table
|
||||
[gh#astropy/astropy#9839]
|
||||
Fixed bug in ``Table.reverse`` for tables that contain non-mutable mixin columns
|
||||
(like ``SkyCoord``) for which in-place item update is not allowed.
|
||||
[gh#astropy/astropy#9933]
|
||||
Tables containing Magnitude, decibel, and dex columns can now be saved to
|
||||
``ecsv`` files.
|
||||
[gh#astropy/astropy#10027]
|
||||
Fixed bug where adding or inserting a row fails on a table with an index
|
||||
defined on a column that is not the first one.
|
||||
[gh#astropy/astropy#10068]
|
||||
Ensured that ``table.show_in_browser`` also worked for mixin columns like
|
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``Time`` and ``SkyCoord``.
|
||||
* astropy.time
|
||||
[gh#astropy/astropy#9679]
|
||||
Fix inaccuracy when converting between TimeDelta and datetime.timedelta.
|
||||
[gh#astropy/astropy#9812]
|
||||
Fixed exception when changing ``format`` in the case when ``out_subfmt`` is
|
||||
defined and is incompatible with the new format.
|
||||
[gh#astropy/astropy#9812]
|
||||
Fixed exceptions in ``Time.to_value()``: when supplying any ``subfmt`` argument
|
||||
for string-based formats like 'iso', and for ``subfmt='long'`` for the formats
|
||||
'byear', 'jyear', and 'decimalyear'.
|
||||
[gh#astropy/astropy#9969]
|
||||
Fixed bug where the location attribute was lost when creating a new ``Time``
|
||||
object from an existing ``Time`` or list of ``Time`` objects.
|
||||
[gh#astropy/astropy#10034]
|
||||
Fixed a bug where an exception occurred when creating a ``Time`` object
|
||||
if the ``val1`` argument was a regular double and the ``val2`` argument
|
||||
was a ``longdouble``.
|
||||
* astropy.timeseries
|
||||
[gh#astropy/astropy#10013]
|
||||
Fixed issue with reference time for the ``transit_time`` parameter returned by
|
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the ``BoxLeastSquares`` periodogram. Now, the ``transit_time`` will be within
|
||||
the range of the input data and arbitrary time offsets/zero points no longer
|
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affect results.
|
||||
* astropy.units
|
||||
[gh#astropy/astropy#9948]
|
||||
Fix for ``quantity_input`` annotation raising an exception on iterable
|
||||
types that don't define a general ``__contains__`` for checking if ``None``
|
||||
is contained (e.g. Enum as of python3.8), by instead checking for instance of
|
||||
Sequence.
|
||||
[gh#astropy/astropy#10066]
|
||||
Fix for ``u.Quantity`` not taking into account ``ndmin`` if constructed from
|
||||
another ``u.Quantity`` instance with different but convertible unit
|
||||
* astropy.utils
|
||||
[gh#astropy/astropy#9981]
|
||||
Fixed ``deprecated_renamed_argument`` not passing in user value to
|
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deprecated keyword when the keyword has no new name.
|
||||
[gh#astropy/astropy#9985]
|
||||
Fixed ``deprecated_renamed_argument`` not issuing a deprecation warning when
|
||||
deprecated keyword without new name is passed in as positional argument.
|
||||
[gh#astropy/astropy#10007]
|
||||
Fixed detection of read-only filesystems in the caching code.
|
||||
* astropy.visualization
|
||||
[gh#astropy/astropy#9848]
|
||||
Fixed bug from matplotlib >=3.1 where an empty Quantity array is
|
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sent for unit conversion as an empty list.
|
||||
[gh#astropy/astropy#9913]
|
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Fix bug in ``ZScaleInterval`` to return the array minimum and
|
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maximum when there are less then ``min_npixels`` in the input array.
|
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[gh#astropy/astropy#8004, gh#astropy/astropy#9991]
|
||||
Fix a bug in simplifying axis labels that affected non-rectangular frames.
|
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* Increase minimum asdf version to 2.5.2.
|
||||
[gh#astropy/astropy#9996, gh#astropy/astropy#9819]
|
||||
* Updated wcslib to v7.2. [gh#astropy/astropy#10021]
|
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- updated test requirements and recommends
|
||||
- run pytest directly
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-------------------------------------------------------------------
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Tue Jan 7 10:19:19 UTC 2020 - Sebastian Wagner <sebix+novell.com@sebix.at>
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@ -19,7 +19,7 @@
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%{?!python_module:%define python_module() python-%{**} python3-%{**}}
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%define skip_python2 1
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Name: python-astropy
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Version: 4.0
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Version: 4.0.1.post1
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Release: 0
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Summary: Community-developed python astronomy tools
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License: BSD-3-Clause
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@ -31,9 +31,7 @@ Source100: python-astropy-rpmlintrc
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BuildRequires: %{python_module Cython >= 0.21}
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BuildRequires: %{python_module astropy-helpers}
|
||||
BuildRequires: %{python_module devel}
|
||||
BuildRequires: %{python_module ipython}
|
||||
BuildRequires: %{python_module matplotlib >= 2.1}
|
||||
BuildRequires: %{python_module numpy-devel >= 1.7.0}
|
||||
BuildRequires: %{python_module numpy-devel >= 1.16}
|
||||
BuildRequires: %{python_module ply}
|
||||
BuildRequires: %{python_module setuptools}
|
||||
BuildRequires: fdupes
|
||||
@ -53,34 +51,40 @@ Requires: python-numpy >= 1.7.0
|
||||
Recommends: libxml2-tools
|
||||
Recommends: python-Jinja2
|
||||
Recommends: python-PyYAML
|
||||
Recommends: python-asdf >= 2.5
|
||||
Recommends: python-beautifulsoup4
|
||||
Recommends: python-Bottleneck
|
||||
Recommends: python-bleach
|
||||
Recommends: python-h5py
|
||||
Recommends: python-ipython
|
||||
Recommends: python-jplephem
|
||||
Recommends: python-matplotlib >= 2.1
|
||||
Recommends: python-pandas
|
||||
Recommends: python-scikit-image
|
||||
Recommends: python-scipy
|
||||
Recommends: python-scipy >= 0.18
|
||||
Conflicts: perl-Data-ShowTable
|
||||
# SECTION Optional requirements
|
||||
BuildRequires: %{python_module Bottleneck}
|
||||
BuildRequires: %{python_module Jinja2}
|
||||
BuildRequires: %{python_module PyYAML}
|
||||
BuildRequires: %{python_module asdf >= 2.5}
|
||||
BuildRequires: %{python_module beautifulsoup4}
|
||||
BuildRequires: %{python_module bleach}
|
||||
BuildRequires: %{python_module h5py}
|
||||
BuildRequires: %{python_module ipython}
|
||||
BuildRequires: %{python_module jplephem}
|
||||
BuildRequires: %{python_module matplotlib >= 2.1}
|
||||
BuildRequires: %{python_module pandas}
|
||||
BuildRequires: %{python_module scipy}
|
||||
BuildRequires: %{python_module scikit-image}
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||||
BuildRequires: %{python_module scipy >= 0.18}
|
||||
# /SECTION
|
||||
# SECTION test requirements
|
||||
BuildRequires: %{python_module dbm}
|
||||
BuildRequires: %{python_module mpmath}
|
||||
BuildRequires: %{python_module pytest >= 3.1.0}
|
||||
BuildRequires: %{python_module pytest-arraydiff >= 0.1}
|
||||
BuildRequires: %{python_module objgraph}
|
||||
BuildRequires: %{python_module pytest >= 3.1}
|
||||
BuildRequires: %{python_module pytest-astropy}
|
||||
BuildRequires: %{python_module pytest-doctestplus}
|
||||
BuildRequires: %{python_module pytest-openfiles}
|
||||
BuildRequires: %{python_module pytest-remotedata}
|
||||
BuildRequires: %{python_module pytest-mpl}
|
||||
# /SECTION
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%python_subpackages
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@ -108,9 +112,14 @@ echo "use_system_libraries=1" >> setup.cfg
|
||||
%install
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%python_install --use-system-libraries --offline
|
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chmod a-x %{buildroot}%{python_sitearch}/astropy/wcs/tests/data/header_with_time.fits
|
||||
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||||
# Deduplicating files can generate a RPMLINT warning for pyc mtime
|
||||
%{python_expand %fdupes %{buildroot}%{$python_sitearch}
|
||||
rm -rf %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/__pycache__/__init__.*.pyc
|
||||
rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/*_test.*.pyc
|
||||
rm -rf %{buildroot}%{$python_sitearch}/astropy/io/votable/tests/__pycache__/__init__.*.pyc
|
||||
rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/__pycache__/__init__.*.pyc
|
||||
rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/__pycache__/__init__.*.pyc
|
||||
$python -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
|
||||
$python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/astropy/io/misc/tests/
|
||||
@ -125,12 +134,16 @@ $python -O -m compileall -d %{$python_sitearch} %{buildroot}%{$python_sitearch}/
|
||||
|
||||
%check
|
||||
export PYTHONDONTWRITEBYTECODE=1
|
||||
pushd static
|
||||
%{python_expand export PYTHONPATH="%{buildroot}%{$python_sitearch}"
|
||||
$python -B -c "import astropy;astropy.test()"
|
||||
rm -rf %{buildroot}%{$python_sitearch}/astropy/wcs/tests/extension/build
|
||||
# http://docs.astropy.org/en/latest/development/testguide.html#running-tests
|
||||
%python_exec setup.py build_ext --inplace --offline
|
||||
%ifarch aarch64
|
||||
# doctest failure because of precision errors
|
||||
%define skippytest -k 'not bayesian_info_criterion_lsq'
|
||||
%endif
|
||||
%{pytest_arch -W "ignore:the imp module is deprecated:DeprecationWarning" \
|
||||
-W "ignore:Unknown pytest.mark.openfiles_ignore:pytest.PytestUnknownMarkWarning" \
|
||||
--ignore "docs/whatsnew" %{?skippytest}
|
||||
}
|
||||
popd
|
||||
|
||||
%files %{python_files}
|
||||
%doc CHANGES.rst README.rst
|
||||
|
||||
Loading…
Reference in New Issue
Block a user